Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX3O60493 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX3O60493 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SNX3O60493 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.71■□□□□ 0.58
SNX3O60493 AC084018.2-201ENST00000613093 2607 ntBASIC18.7■□□□□ 0.58
SNX3O60493 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
SNX3O60493 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SNX3O60493 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SNX3O60493 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX3O60493 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SNX3O60493 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX3O60493 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SNX3O60493 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX3O60493 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SNX3O60493 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX3O60493 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SNX3O60493 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX3O60493 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX3O60493 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SNX3O60493 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX3O60493 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
SNX3O60493 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX3O60493 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SNX3O60493 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 AC141586.5-201ENST00000624546 2050 ntBASIC18.69■□□□□ 0.58
SNX3O60493 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX3O60493 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.69■□□□□ 0.58
SNX3O60493 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX3O60493 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNX3O60493 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.69■□□□□ 0.58
SNX3O60493 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX3O60493 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SNX3O60493 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX3O60493 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SNX3O60493 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX3O60493 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SNX3O60493 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX3O60493 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX3O60493 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNX3O60493 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SNX3O60493 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX3O60493 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SNX3O60493 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX3O60493 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SNX3O60493 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SNX3O60493 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNX3O60493 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX3O60493 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX3O60493 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNX3O60493 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SNX3O60493 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNX3O60493 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SNX3O60493 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX3O60493 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SNX3O60493 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX3O60493 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX3O60493 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SNX3O60493 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX3O60493 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX3O60493 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX3O60493 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX3O60493 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX3O60493 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms