Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRRM3A6NNA2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SRRM3A6NNA2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.64■□□□□ 0.73
SRRM3A6NNA2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.64■□□□□ 0.73
SRRM3A6NNA2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.64■□□□□ 0.73
SRRM3A6NNA2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRRM3A6NNA2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SRRM3A6NNA2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRRM3A6NNA2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRRM3A6NNA2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 AC141586.3-201ENST00000562166 1838 ntBASIC19.63■□□□□ 0.73
SRRM3A6NNA2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 KRT16P2-201ENST00000414673 1423 ntBASIC19.63■□□□□ 0.73
SRRM3A6NNA2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.63■□□□□ 0.73
SRRM3A6NNA2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 AC145285.6-201ENST00000604632 637 ntBASIC19.62■□□□□ 0.73
SRRM3A6NNA2 MIR6786-201ENST00000616843 113 ntBASIC19.62■□□□□ 0.73
SRRM3A6NNA2 AC100791.3-201ENST00000617619 330 ntBASIC19.62■□□□□ 0.73
SRRM3A6NNA2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
SRRM3A6NNA2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 AC239809.2-201ENST00000415381 517 ntBASIC19.61■□□□□ 0.73
SRRM3A6NNA2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 NTF6B-201ENST00000591913 560 ntBASIC19.61■□□□□ 0.73
SRRM3A6NNA2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 AC110285.5-201ENST00000611501 352 ntBASIC19.61■□□□□ 0.73
SRRM3A6NNA2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRRM3A6NNA2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms