Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 AL109923.1-201ENST00000618799 583 ntBASIC18.97■□□□□ 0.63
CCDC189A1A4V9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 TEX21P-204ENST00000641479 1693 ntBASIC18.97■□□□□ 0.63
CCDC189A1A4V9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 SOX15-203ENST00000570788 1093 ntBASIC18.96■□□□□ 0.63
CCDC189A1A4V9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 AL161938.1-201ENST00000569833 2180 ntBASIC18.96■□□□□ 0.63
CCDC189A1A4V9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC189A1A4V9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 UNC93B4-201ENST00000505679 747 ntBASIC18.95■□□□□ 0.62
CCDC189A1A4V9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC189A1A4V9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC189A1A4V9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC189A1A4V9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC189A1A4V9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CCDC189A1A4V9 NOC2LP2-201ENST00000407594 1944 ntBASIC18.94■□□□□ 0.62
CCDC189A1A4V9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC189A1A4V9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC189A1A4V9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms