Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ESRRAP1-201ENST00000400596 1257 ntBASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AC083906.6-201ENST00000641366 219 ntBASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV6-8A0A0A6YYG3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AL512353.2-201ENST00000448759 1962 ntBASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TSPY23P-201ENST00000440136 739 ntBASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AC233263.1-201ENST00000578059 224 ntBASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms