Protein–RNA interactions for Protein: Q9BQ66

KRTAP4-12, Keratin-associated protein 4-12, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-12Q9BQ66 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MROH7-203ENST00000395690 3413 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 LRRC37A9P-201ENST00000603850 5376 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 CD163L1-202ENST00000416109 4603 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 TRIM9-203ENST00000360392 3726 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 GNG8-201ENST00000300873 216 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RNU1-47P-201ENST00000362966 163 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 U8.4-201ENST00000363626 134 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RNU1-34P-201ENST00000364421 157 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RNA5SP189-201ENST00000364920 115 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 SNORA25B-201ENST00000365507 128 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RNU1-8P-201ENST00000384328 165 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RNA5SP297-201ENST00000391029 113 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 SNORD88C-201ENST00000408061 91 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RN7SKP119-201ENST00000410753 273 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 GNG5P5-201ENST00000420444 220 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 AL139327.3-201ENST00000433721 379 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 AC069285.2-201ENST00000440210 275 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 FUNDC2P4-201ENST00000441207 421 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RPS29P16-201ENST00000452798 171 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RN7SL241P-201ENST00000482973 236 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RN7SL416P-201ENST00000494042 298 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 AC015795.1-201ENST00000513669 327 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RNU6-1262P-201ENST00000516217 96 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RNU7-161P-201ENST00000517289 62 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MIR3689F-201ENST00000579617 66 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MIR3690-201ENST00000580266 75 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MIR4314-201ENST00000583321 92 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MIR4635-201ENST00000583759 79 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 AL645939.4-201ENST00000604495 135 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RNF215-208ENST00000619645 555 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MTRNR2L9-201ENST00000622562 75 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 AC010297.1-201ENST00000623948 149 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ZNF544-220ENST00000627781 383 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MIR3120-201ENST00000636555 81 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 BBS9-202ENST00000350941 3899 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 TMBIM1-214ENST00000444881 2936 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MR1-205ENST00000434571 7479 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-12Q9BQ66 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms