RNA–Protein interactions for RNA: ENST00000420881.6

PCDH19-203, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 7,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-203ENST00000420881 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
PCDH19-203ENST00000420881 MYT1Q01538 1121 aa15.29■□□□□ 0.04
PCDH19-203ENST00000420881 ERICH6Q7L0X2 663 aa14.87□□□□□ -0.03
PCDH19-203ENST00000420881 CCER1Q8TC90 406 aaPredicted RBP14.84□□□□□ -0.03
PCDH19-203ENST00000420881 CENPBP07199 599 aaPredicted RBP14.52□□□□□ -0.09
PCDH19-203ENST00000420881 YTHDC1Q96MU7 727 aaKnown RBP14.45□□□□□ -0.1
PCDH19-203ENST00000420881 TTBK1Q5TCY1 1321 aaPredicted RBP14.39□□□□□ -0.11
PCDH19-203ENST00000420881 DCAF8L2P0C7V8 631 aa14.37□□□□□ -0.11
PCDH19-203ENST00000420881 NEFLP07196 543 aa14.18□□□□□ -0.14
PCDH19-203ENST00000420881 ZEB1P37275 1124 aaPredicted RBP14.15□□□□□ -0.14
PCDH19-203ENST00000420881 APLP2Q06481 763 aa14.07□□□□□ -0.16
PCDH19-203ENST00000420881 DAXXQ9UER7 740 aaPredicted RBP14.02□□□□□ -0.16
PCDH19-203ENST00000420881 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
PCDH19-203ENST00000420881 PCGF6Q9BYE7 350 aa13.84□□□□□ -0.19
PCDH19-203ENST00000420881 RTL5Q5HYW3 569 aaPredicted RBP13.79□□□□□ -0.2
PCDH19-203ENST00000420881 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.21
PCDH19-203ENST00000420881 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
PCDH19-203ENST00000420881 ZNF316A6NFI3 1004 aaPredicted RBP13.62□□□□□ -0.23
PCDH19-203ENST00000420881 GLIPR1L2Q4G1C9 344 aa13.57□□□□□ -0.24
PCDH19-203ENST00000420881 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
PCDH19-203ENST00000420881 CLSPNQ9HAW4 1339 aa13.32□□□□□ -0.28
PCDH19-203ENST00000420881 EIF5BO60841 1220 aaKnown RBP13.27□□□□□ -0.29
PCDH19-203ENST00000420881 HRCP23327 699 aa13.24□□□□□ -0.29
PCDH19-203ENST00000420881 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
PCDH19-203ENST00000420881 TRIM26Q12899 539 aaPredicted RBP13.19□□□□□ -0.3
PCDH19-203ENST00000420881 CDK11AQ9UQ88 783 aaPredicted RBP13.19□□□□□ -0.3
PCDH19-203ENST00000420881 ANP32BQ92688 251 aaKnown RBP13.16□□□□□ -0.3
PCDH19-203ENST00000420881 ATP1B4Q9UN42 357 aaPredicted RBP13.14□□□□□ -0.31
PCDH19-203ENST00000420881 ANP32AP39687 249 aaKnown RBP13.06□□□□□ -0.32
PCDH19-203ENST00000420881 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
PCDH19-203ENST00000420881 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
PCDH19-203ENST00000420881 UBTFP17480 764 aaKnown RBP13.03□□□□□ -0.32
PCDH19-203ENST00000420881 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
PCDH19-203ENST00000420881 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
PCDH19-203ENST00000420881 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
PCDH19-203ENST00000420881 GTF3C3Q9Y5Q9 886 aa12.99□□□□□ -0.33
PCDH19-203ENST00000420881 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
PCDH19-203ENST00000420881 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
PCDH19-203ENST00000420881 BCANQ96GW7 911 aa12.84□□□□□ -0.35
PCDH19-203ENST00000420881 SLC4A1APQ9BWU0 796 aaKnown RBP12.8□□□□□ -0.36
PCDH19-203ENST00000420881 CNGB1Q14028 1251 aaPredicted RBP12.79□□□□□ -0.36
PCDH19-203ENST00000420881 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.36
PCDH19-203ENST00000420881 ANP32CO43423 234 aa12.77□□□□□ -0.37
PCDH19-203ENST00000420881 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
PCDH19-203ENST00000420881 UPF2Q9HAU5 1272 aaKnown RBP12.75□□□□□ -0.37
PCDH19-203ENST00000420881 CDK11BP21127 795 aaKnown RBP12.75□□□□□ -0.37
PCDH19-203ENST00000420881 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
PCDH19-203ENST00000420881 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
PCDH19-203ENST00000420881 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
PCDH19-203ENST00000420881 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
PCDH19-203ENST00000420881 ITGAEP38570 1179 aa12.69□□□□□ -0.38
PCDH19-203ENST00000420881 NCLP19338 710 aaKnown RBP12.68□□□□□ -0.38
PCDH19-203ENST00000420881 NEFMP07197 916 aa12.66□□□□□ -0.38
PCDH19-203ENST00000420881 ANP32EQ9BTT0 268 aa12.65□□□□□ -0.38
PCDH19-203ENST00000420881 NBR1Q14596 966 aa12.64□□□□□ -0.39
PCDH19-203ENST00000420881 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
PCDH19-203ENST00000420881 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
PCDH19-203ENST00000420881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
PCDH19-203ENST00000420881 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
PCDH19-203ENST00000420881 ARXQ96QS3 562 aa12.49□□□□□ -0.41
PCDH19-203ENST00000420881 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
PCDH19-203ENST00000420881 FKBP8Q14318 412 aa12.48□□□□□ -0.41
PCDH19-203ENST00000420881 NAP1L5Q96NT1 182 aaPredicted RBP12.46□□□□□ -0.41
PCDH19-203ENST00000420881 DNTTIP2Q5QJE6 756 aaKnown RBP12.45□□□□□ -0.42
PCDH19-203ENST00000420881 SLC24A1O60721 1099 aa12.45□□□□□ -0.42
PCDH19-203ENST00000420881 BECN1Q14457 450 aa12.45□□□□□ -0.42
PCDH19-203ENST00000420881 GOLGA6L22H0YM25 854 aa12.44□□□□□ -0.42
PCDH19-203ENST00000420881 ZNF326Q5BKZ1 582 aaKnown RBP12.4□□□□□ -0.42
PCDH19-203ENST00000420881 NEUROD1Q13562 356 aa12.4□□□□□ -0.42
PCDH19-203ENST00000420881 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.4□□□□□ -0.43
PCDH19-203ENST00000420881 PTMAP06454 111 aaKnown RBP12.39□□□□□ -0.43
PCDH19-203ENST00000420881 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
PCDH19-203ENST00000420881 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
PCDH19-203ENST00000420881 TRIM52Q96A61 297 aa12.36□□□□□ -0.43
PCDH19-203ENST00000420881 FAM50AQ14320 339 aaKnown RBP12.34□□□□□ -0.43
PCDH19-203ENST00000420881 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
PCDH19-203ENST00000420881 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
PCDH19-203ENST00000420881 PPM1GO15355 546 aaPredicted RBP12.32□□□□□ -0.44
PCDH19-203ENST00000420881 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
PCDH19-203ENST00000420881 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
PCDH19-203ENST00000420881 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
PCDH19-203ENST00000420881 TNNT3P45378 269 aaPredicted RBP12.28□□□□□ -0.44
PCDH19-203ENST00000420881 NRDCO43847 1150 aa12.27□□□□□ -0.45
PCDH19-203ENST00000420881 HNRNPUQ00839 825 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCDH19-203ENST00000420881 CALRP27797 417 aaKnown RBP12.24□□□□□ -0.45
PCDH19-203ENST00000420881 MYH16Q9H6N6 1097 aa12.23□□□□□ -0.45
PCDH19-203ENST00000420881 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
PCDH19-203ENST00000420881 MSNP26038 577 aaKnown RBP12.22□□□□□ -0.45
PCDH19-203ENST00000420881 L1TD1Q5T7N2 865 aaKnown RBP12.21□□□□□ -0.45
PCDH19-203ENST00000420881 PTMSP20962 102 aa12.19□□□□□ -0.46
PCDH19-203ENST00000420881 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
PCDH19-203ENST00000420881 CASC1Q6TDU7 716 aa12.15□□□□□ -0.46
PCDH19-203ENST00000420881 NOP58Q9Y2X3 529 aaKnown RBP12.14□□□□□ -0.47
PCDH19-203ENST00000420881 FAM9BQ8IZU0 186 aa12.11□□□□□ -0.47
PCDH19-203ENST00000420881 TMC1Q8TDI8 760 aa12.11□□□□□ -0.47
PCDH19-203ENST00000420881 USP35Q9P2H5 1018 aa12.11□□□□□ -0.47
PCDH19-203ENST00000420881 SETQ01105 290 aaPredicted RBP12.1□□□□□ -0.47
PCDH19-203ENST00000420881 DEKP35659 375 aaKnown RBP12.08□□□□□ -0.48
PCDH19-203ENST00000420881 WDR43Q15061 677 aaKnown RBP eCLIP12.06□□□□□ -0.48
PCDH19-203ENST00000420881 GOLGA6L1Q8N7Z2 621 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms