RNA–Protein interactions for RNA: ENST00000342695.8

ATP13A4-202, Transcript of ATPase 13A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP13A4, Length 4,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4-202ENST00000342695 NISCHQ9Y2I1 1504 aa11.99□□□□□ -0.49
ATP13A4-202ENST00000342695 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
ATP13A4-202ENST00000342695 SHROOM4Q9ULL8 1493 aa10.53□□□□□ -0.72
ATP13A4-202ENST00000342695 SUPT5HO00267 1087 aaKnown RBP10.48□□□□□ -0.73
ATP13A4-202ENST00000342695 ABCC9O60706 1549 aa10.37□□□□□ -0.75
ATP13A4-202ENST00000342695 CCDC180Q9P1Z9 1646 aa10.17□□□□□ -0.78
ATP13A4-202ENST00000342695 FAM9AQ8IZU1 332 aaPredicted RBP10.07□□□□□ -0.8
ATP13A4-202ENST00000342695 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
ATP13A4-202ENST00000342695 ZCCHC6Q5VYS8 1495 aaKnown RBP9.92□□□□□ -0.82
ATP13A4-202ENST00000342695 RB1CC1Q8TDY2 1594 aa9.9□□□□□ -0.82
ATP13A4-202ENST00000342695 TRIM41Q8WV44 630 aa9.88□□□□□ -0.83
ATP13A4-202ENST00000342695 APLP2Q06481 763 aa9.86□□□□□ -0.83
ATP13A4-202ENST00000342695 NACADO15069 1562 aa9.86□□□□□ -0.83
ATP13A4-202ENST00000342695 SCRIBQ14160 1630 aa9.78□□□□□ -0.84
ATP13A4-202ENST00000342695 EHMT2Q96KQ7 1210 aa9.77□□□□□ -0.85
ATP13A4-202ENST00000342695 DCAF1Q9Y4B6 1507 aa9.72□□□□□ -0.85
ATP13A4-202ENST00000342695 UBTFP17480 764 aaKnown RBP9.68□□□□□ -0.86
ATP13A4-202ENST00000342695 MYO15BQ96JP2 1530 aa9.62□□□□□ -0.87
ATP13A4-202ENST00000342695 ATP1B4Q9UN42 357 aaPredicted RBP9.59□□□□□ -0.87
ATP13A4-202ENST00000342695 RANGAP1P46060 587 aaPredicted RBP9.59□□□□□ -0.87
ATP13A4-202ENST00000342695 HRCP23327 699 aa9.53□□□□□ -0.88
ATP13A4-202ENST00000342695 PCGF6Q9BYE7 350 aa9.5□□□□□ -0.89
ATP13A4-202ENST00000342695 CHIC1Q5VXU3 224 aa9.49□□□□□ -0.89
ATP13A4-202ENST00000342695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.45□□□□□ -0.9
ATP13A4-202ENST00000342695 HNRNPUL2Q1KMD3 747 aaKnown RBP9.45□□□□□ -0.9
ATP13A4-202ENST00000342695 BAZ1BQ9UIG0 1483 aaKnown RBP9.43□□□□□ -0.9
ATP13A4-202ENST00000342695 BAZ1AQ9NRL2 1556 aaPredicted RBP9.43□□□□□ -0.9
ATP13A4-202ENST00000342695 FBLN2P98095 1184 aa9.43□□□□□ -0.9
ATP13A4-202ENST00000342695 TTBK1Q5TCY1 1321 aaPredicted RBP9.4□□□□□ -0.91
ATP13A4-202ENST00000342695 RSF1Q96T23 1441 aaPredicted RBP9.39□□□□□ -0.91
ATP13A4-202ENST00000342695 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
ATP13A4-202ENST00000342695 CSRNP3Q8WYN3 585 aa9.32□□□□□ -0.92
ATP13A4-202ENST00000342695 SMARCA2P51531 1590 aa9.32□□□□□ -0.92
ATP13A4-202ENST00000342695 ZEB1P37275 1124 aaPredicted RBP9.31□□□□□ -0.92
ATP13A4-202ENST00000342695 ERCC6Q03468 1493 aa9.3□□□□□ -0.92
ATP13A4-202ENST00000342695 CECR2Q9BXF3 1484 aa9.29□□□□□ -0.92
ATP13A4-202ENST00000342695 TRIM26Q12899 539 aaPredicted RBP9.27□□□□□ -0.92
ATP13A4-202ENST00000342695 NPM1P06748 294 aaKnown RBP eCLIP9.25□□□□□ -0.93
ATP13A4-202ENST00000342695 CHMP7Q8WUX9 453 aaPredicted RBP9.25□□□□□ -0.93
ATP13A4-202ENST00000342695 PDS5BQ9NTI5 1447 aa9.25□□□□□ -0.93
ATP13A4-202ENST00000342695 PELP1Q8IZL8 1130 aaKnown RBP9.25□□□□□ -0.93
ATP13A4-202ENST00000342695 CDK11AQ9UQ88 783 aaPredicted RBP9.23□□□□□ -0.93
ATP13A4-202ENST00000342695 LOC105371045A0A1W2PR82 267 aa9.23□□□□□ -0.93
ATP13A4-202ENST00000342695 PPARGC1BQ86YN6 1023 aaKnown RBP9.23□□□□□ -0.93
ATP13A4-202ENST00000342695 MROH2BQ7Z745 1585 aa9.19□□□□□ -0.94
ATP13A4-202ENST00000342695 ATAD2BQ9ULI0 1458 aa9.18□□□□□ -0.94
ATP13A4-202ENST00000342695 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
ATP13A4-202ENST00000342695 EEA1Q15075 1411 aa9.16□□□□□ -0.94
ATP13A4-202ENST00000342695 CADPSQ9ULU8 1353 aa9.16□□□□□ -0.94
ATP13A4-202ENST00000342695 CCER1Q8TC90 406 aaPredicted RBP9.16□□□□□ -0.94
ATP13A4-202ENST00000342695 KIF27Q86VH2 1401 aa9.13□□□□□ -0.95
ATP13A4-202ENST00000342695 ITGAEP38570 1179 aa9.13□□□□□ -0.95
ATP13A4-202ENST00000342695 P3H3Q8IVL6 736 aa9.12□□□□□ -0.95
ATP13A4-202ENST00000342695 NCAPD3P42695 1498 aa9.11□□□□□ -0.95
ATP13A4-202ENST00000342695 SMARCA4P51532 1647 aa9.1□□□□□ -0.95
ATP13A4-202ENST00000342695 TOP2AP11388 1531 aaKnown RBP9.1□□□□□ -0.95
ATP13A4-202ENST00000342695 CCDC88BA6NC98 1476 aa9.09□□□□□ -0.95
ATP13A4-202ENST00000342695 FAM50AQ14320 339 aaKnown RBP9.08□□□□□ -0.96
ATP13A4-202ENST00000342695 EIF4G1Q04637 1599 aaKnown RBP9.07□□□□□ -0.96
ATP13A4-202ENST00000342695 ABCC8Q09428 1581 aa9.05□□□□□ -0.96
ATP13A4-202ENST00000342695 CEP164Q9UPV0 1460 aa9.03□□□□□ -0.96
ATP13A4-202ENST00000342695 SOGA1O94964 1423 aa9.02□□□□□ -0.97
ATP13A4-202ENST00000342695 ARID3CA6NKF2 412 aa9.02□□□□□ -0.97
ATP13A4-202ENST00000342695 CENPBP07199 599 aaPredicted RBP9.01□□□□□ -0.97
ATP13A4-202ENST00000342695 ESF1Q9H501 851 aaKnown RBP9.01□□□□□ -0.97
ATP13A4-202ENST00000342695 CUX2O14529 1486 aa9□□□□□ -0.97
ATP13A4-202ENST00000342695 PLEKHD1A6NEE1 506 aa8.99□□□□□ -0.97
ATP13A4-202ENST00000342695 TRIM52Q96A61 297 aa8.99□□□□□ -0.97
ATP13A4-202ENST00000342695 WIZO95785 1651 aa8.99□□□□□ -0.97
ATP13A4-202ENST00000342695 CARMIL1Q5VZK9 1371 aa8.99□□□□□ -0.97
ATP13A4-202ENST00000342695 FANCD2Q9BXW9 1451 aa8.98□□□□□ -0.97
ATP13A4-202ENST00000342695 ZNF777Q9ULD5 760 aaPredicted RBP8.98□□□□□ -0.97
ATP13A4-202ENST00000342695 GOLGA3Q08378 1498 aa8.98□□□□□ -0.97
ATP13A4-202ENST00000342695 CLIP1P30622 1438 aa8.95□□□□□ -0.98
ATP13A4-202ENST00000342695 MYT1Q01538 1121 aa8.95□□□□□ -0.98
ATP13A4-202ENST00000342695 MTUS2Q5JR59 1369 aa8.94□□□□□ -0.98
ATP13A4-202ENST00000342695 TDRD9Q8NDG6 1382 aaKnown RBP8.94□□□□□ -0.98
ATP13A4-202ENST00000342695 HMGXB3Q12766 1538 aa8.93□□□□□ -0.98
ATP13A4-202ENST00000342695 CC2D2AQ9P2K1 1620 aa8.93□□□□□ -0.98
ATP13A4-202ENST00000342695 TSPY4P0CV99 314 aa8.93□□□□□ -0.98
ATP13A4-202ENST00000342695 TSPY10P0CW01 314 aa8.93□□□□□ -0.98
ATP13A4-202ENST00000342695 CARMIL2Q6F5E8 1435 aa8.93□□□□□ -0.98
ATP13A4-202ENST00000342695 BICRAQ9NZM4 1560 aa8.92□□□□□ -0.98
ATP13A4-202ENST00000342695 TNIKQ9UKE5 1360 aa8.9□□□□□ -0.98
ATP13A4-202ENST00000342695 ACIN1Q9UKV3 1341 aaKnown RBP8.9□□□□□ -0.98
ATP13A4-202ENST00000342695 OSCARQ8IYS5 282 aa8.89□□□□□ -0.99
ATP13A4-202ENST00000342695 KCNH8Q96L42 1107 aa8.89□□□□□ -0.99
ATP13A4-202ENST00000342695 FHAD1B1AJZ9 1412 aa8.87□□□□□ -0.99
ATP13A4-202ENST00000342695 CFTRP13569 1480 aa8.86□□□□□ -0.99
ATP13A4-202ENST00000342695 DNAJC5BQ9UF47 199 aa8.85□□□□□ -0.99
ATP13A4-202ENST00000342695 TRHP20396 242 aaPredicted RBP8.83□□□□□ -1
ATP13A4-202ENST00000342695 DIEXFQ68CQ4 756 aaKnown RBP8.83□□□□□ -1
ATP13A4-202ENST00000342695 JPH4Q96JJ6 628 aa8.83□□□□□ -1
ATP13A4-202ENST00000342695 CEP162Q5TB80 1403 aa8.82□□□□□ -1
ATP13A4-202ENST00000342695 STAG3Q9UJ98 1225 aa8.82□□□□□ -1
ATP13A4-202ENST00000342695 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
ATP13A4-202ENST00000342695 BCANQ96GW7 911 aa8.82□□□□□ -1
ATP13A4-202ENST00000342695 CFDP1Q9UEE9 299 aaPredicted RBP8.82□□□□□ -1
ATP13A4-202ENST00000342695 SCAF1Q9H7N4 1312 aaKnown RBP8.82□□□□□ -1
ATP13A4-202ENST00000342695 RAPGEF2Q9Y4G8 1499 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms