Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 LRRC37A6P-202ENST00000448648 5444 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC092435.4-201ENST00000623012 4159 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ATM-215ENST00000530958 5718 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL359263.1-201ENST00000441188 2796 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 BTN2A2-202ENST00000356709 3590 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 MAPK10-303ENST00000641324 3959 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ITPK1-AS1-201ENST00000553639 4701 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 SNORA25.3-201ENST00000363205 127 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 Y_RNA.125-201ENST00000363371 111 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNA5SP472-201ENST00000363868 119 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 SNORA70G-201ENST00000383923 142 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 MIR599-201ENST00000385069 95 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 SPTLC1P2-201ENST00000407089 121 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 MYL6P3-201ENST00000436904 432 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 RN7SL39P-201ENST00000462264 297 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 RN7SL817P-201ENST00000480777 288 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC025458.1-201ENST00000506046 166 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL671862.1-201ENST00000515851 349 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNU6-548P-201ENST00000517083 115 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNU4-60P-201ENST00000517239 135 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNU6-586P-201ENST00000517265 104 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC016629.2-201ENST00000597341 199 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL589743.6-201ENST00000611025 117 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 uc_338.14-201ENST00000613162 166 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC068870.2-201ENST00000620635 389 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL731556.1-201ENST00000394628 3711 ntBASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-11Q9BYQ6 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms