RNA–Protein interactions for RNA: ENST00000367674.6

TNR-202, Transcript of tenascin R, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNR, Length 12,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNR-202ENST00000367674 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
TNR-202ENST00000367674 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
TNR-202ENST00000367674 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
TNR-202ENST00000367674 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
TNR-202ENST00000367674 APLP2Q06481 763 aa13.5□□□□□ -0.25
TNR-202ENST00000367674 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
TNR-202ENST00000367674 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.25
TNR-202ENST00000367674 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
TNR-202ENST00000367674 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
TNR-202ENST00000367674 ERICH6Q7L0X2 663 aa13.12□□□□□ -0.31
TNR-202ENST00000367674 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
TNR-202ENST00000367674 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
TNR-202ENST00000367674 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
TNR-202ENST00000367674 TTBK1Q5TCY1 1321 aaPredicted RBP12.94□□□□□ -0.34
TNR-202ENST00000367674 NEFLP07196 543 aa12.88□□□□□ -0.35
TNR-202ENST00000367674 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
TNR-202ENST00000367674 ATP1B4Q9UN42 357 aaPredicted RBP12.87□□□□□ -0.35
TNR-202ENST00000367674 MYT1Q01538 1121 aa12.86□□□□□ -0.35
TNR-202ENST00000367674 RANGAP1P46060 587 aaPredicted RBP12.82□□□□□ -0.36
TNR-202ENST00000367674 UBTFP17480 764 aaKnown RBP12.79□□□□□ -0.36
TNR-202ENST00000367674 DAXXQ9UER7 740 aaPredicted RBP12.63□□□□□ -0.39
TNR-202ENST00000367674 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
TNR-202ENST00000367674 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
TNR-202ENST00000367674 MYT1LQ9UL68 1186 aa12.47□□□□□ -0.41
TNR-202ENST00000367674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
TNR-202ENST00000367674 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
TNR-202ENST00000367674 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
TNR-202ENST00000367674 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
TNR-202ENST00000367674 ITGAEP38570 1179 aa12.33□□□□□ -0.44
TNR-202ENST00000367674 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
TNR-202ENST00000367674 HRCP23327 699 aa12.27□□□□□ -0.44
TNR-202ENST00000367674 RTL5Q5HYW3 569 aaPredicted RBP12.26□□□□□ -0.45
TNR-202ENST00000367674 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
TNR-202ENST00000367674 CLSPNQ9HAW4 1339 aa12.23□□□□□ -0.45
TNR-202ENST00000367674 CHIC1Q5VXU3 224 aa12.17□□□□□ -0.46
TNR-202ENST00000367674 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
TNR-202ENST00000367674 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
TNR-202ENST00000367674 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
TNR-202ENST00000367674 FAM50AQ14320 339 aaKnown RBP12.08□□□□□ -0.48
TNR-202ENST00000367674 LOC105371045A0A1W2PR82 267 aa12.07□□□□□ -0.48
TNR-202ENST00000367674 TRIM52Q96A61 297 aa12.02□□□□□ -0.48
TNR-202ENST00000367674 ANP32CO43423 234 aa12.01□□□□□ -0.49
TNR-202ENST00000367674 CDK11AQ9UQ88 783 aaPredicted RBP11.98□□□□□ -0.49
TNR-202ENST00000367674 NEFMP07197 916 aa11.97□□□□□ -0.49
TNR-202ENST00000367674 NEUROD1Q13562 356 aa11.94□□□□□ -0.5
TNR-202ENST00000367674 CANXP27824 592 aaKnown RBP11.93□□□□□ -0.5
TNR-202ENST00000367674 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
TNR-202ENST00000367674 ABCC9O60706 1549 aa11.87□□□□□ -0.51
TNR-202ENST00000367674 ZNF326Q5BKZ1 582 aaKnown RBP11.86□□□□□ -0.51
TNR-202ENST00000367674 ANP32AP39687 249 aaKnown RBP11.83□□□□□ -0.52
TNR-202ENST00000367674 BCANQ96GW7 911 aa11.81□□□□□ -0.52
TNR-202ENST00000367674 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
TNR-202ENST00000367674 FBLN2P98095 1184 aa11.79□□□□□ -0.52
TNR-202ENST00000367674 GTF3C3Q9Y5Q9 886 aa11.78□□□□□ -0.52
TNR-202ENST00000367674 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.52
TNR-202ENST00000367674 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
TNR-202ENST00000367674 SCRIBQ14160 1630 aa11.74□□□□□ -0.53
TNR-202ENST00000367674 HSP90AA1P07900 732 aaKnown RBP11.73□□□□□ -0.53
TNR-202ENST00000367674 UPF2Q9HAU5 1272 aaKnown RBP11.73□□□□□ -0.53
TNR-202ENST00000367674 BCL11AQ9H165 835 aa11.71□□□□□ -0.53
TNR-202ENST00000367674 ESF1Q9H501 851 aaKnown RBP11.71□□□□□ -0.54
TNR-202ENST00000367674 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
TNR-202ENST00000367674 ZNF777Q9ULD5 760 aaPredicted RBP11.62□□□□□ -0.55
TNR-202ENST00000367674 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
TNR-202ENST00000367674 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
TNR-202ENST00000367674 GLIPR1L2Q4G1C9 344 aa11.59□□□□□ -0.55
TNR-202ENST00000367674 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
TNR-202ENST00000367674 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.59□□□□□ -0.55
TNR-202ENST00000367674 ACIN1Q9UKV3 1341 aaKnown RBP11.59□□□□□ -0.55
TNR-202ENST00000367674 P3H3Q8IVL6 736 aa11.58□□□□□ -0.56
TNR-202ENST00000367674 DCAF1Q9Y4B6 1507 aa11.55□□□□□ -0.56
TNR-202ENST00000367674 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
TNR-202ENST00000367674 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
TNR-202ENST00000367674 HNRNPUQ00839 825 aaKnown RBP eCLIP11.52□□□□□ -0.56
TNR-202ENST00000367674 TMC1Q8TDI8 760 aa11.52□□□□□ -0.57
TNR-202ENST00000367674 CHGAP10645 457 aaKnown RBP11.51□□□□□ -0.57
TNR-202ENST00000367674 FKBP8Q14318 412 aa11.5□□□□□ -0.57
TNR-202ENST00000367674 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
TNR-202ENST00000367674 EIF5BO60841 1220 aaKnown RBP11.5□□□□□ -0.57
TNR-202ENST00000367674 MYH16Q9H6N6 1097 aa11.5□□□□□ -0.57
TNR-202ENST00000367674 CCDC136Q96JN2 1154 aa11.48□□□□□ -0.57
TNR-202ENST00000367674 FAM9BQ8IZU0 186 aa11.47□□□□□ -0.57
TNR-202ENST00000367674 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
TNR-202ENST00000367674 RB1CC1Q8TDY2 1594 aa11.44□□□□□ -0.58
TNR-202ENST00000367674 TSPY4P0CV99 314 aa11.43□□□□□ -0.58
TNR-202ENST00000367674 TSPY10P0CW01 314 aa11.43□□□□□ -0.58
TNR-202ENST00000367674 ZCCHC6Q5VYS8 1495 aaKnown RBP11.42□□□□□ -0.58
TNR-202ENST00000367674 MTUS2Q5JR59 1369 aa11.42□□□□□ -0.58
TNR-202ENST00000367674 ANP32EQ9BTT0 268 aa11.42□□□□□ -0.58
TNR-202ENST00000367674 DDX10Q13206 875 aaKnown RBP11.41□□□□□ -0.58
TNR-202ENST00000367674 BECN1Q14457 450 aa11.4□□□□□ -0.58
TNR-202ENST00000367674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.59
TNR-202ENST00000367674 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
TNR-202ENST00000367674 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
TNR-202ENST00000367674 PLPPR3Q6T4P5 718 aa11.37□□□□□ -0.59
TNR-202ENST00000367674 RSF1Q96T23 1441 aaPredicted RBP11.36□□□□□ -0.59
TNR-202ENST00000367674 MRS2Q9HD23 443 aa11.36□□□□□ -0.59
TNR-202ENST00000367674 NBR1Q14596 966 aa11.36□□□□□ -0.59
TNR-202ENST00000367674 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
TNR-202ENST00000367674 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms