RNA–Protein interactions for RNA: ENST00000613886.4

RUNX1T1-249, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RUNX1T1, Length 7,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-249ENST00000613886 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
RUNX1T1-249ENST00000613886 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
RUNX1T1-249ENST00000613886 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
RUNX1T1-249ENST00000613886 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
RUNX1T1-249ENST00000613886 NISCHQ9Y2I1 1504 aa13.01□□□□□ -0.33
RUNX1T1-249ENST00000613886 APLP2Q06481 763 aa12.89□□□□□ -0.35
RUNX1T1-249ENST00000613886 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
RUNX1T1-249ENST00000613886 TTBK1Q5TCY1 1321 aaPredicted RBP12.84□□□□□ -0.35
RUNX1T1-249ENST00000613886 FAM9AQ8IZU1 332 aaPredicted RBP12.79□□□□□ -0.36
RUNX1T1-249ENST00000613886 RANGAP1P46060 587 aaPredicted RBP12.7□□□□□ -0.38
RUNX1T1-249ENST00000613886 PCGF6Q9BYE7 350 aa12.6□□□□□ -0.39
RUNX1T1-249ENST00000613886 ATP1B4Q9UN42 357 aaPredicted RBP12.59□□□□□ -0.39
RUNX1T1-249ENST00000613886 ERICH6Q7L0X2 663 aa12.47□□□□□ -0.41
RUNX1T1-249ENST00000613886 CCER1Q8TC90 406 aaPredicted RBP12.42□□□□□ -0.42
RUNX1T1-249ENST00000613886 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
RUNX1T1-249ENST00000613886 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
RUNX1T1-249ENST00000613886 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
RUNX1T1-249ENST00000613886 YTHDC1Q96MU7 727 aaKnown RBP12.27□□□□□ -0.45
RUNX1T1-249ENST00000613886 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
RUNX1T1-249ENST00000613886 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
RUNX1T1-249ENST00000613886 NEFLP07196 543 aa12.2□□□□□ -0.46
RUNX1T1-249ENST00000613886 MYT1LQ9UL68 1186 aa12.16□□□□□ -0.46
RUNX1T1-249ENST00000613886 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
RUNX1T1-249ENST00000613886 ITGAEP38570 1179 aa12.09□□□□□ -0.47
RUNX1T1-249ENST00000613886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.09□□□□□ -0.47
RUNX1T1-249ENST00000613886 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
RUNX1T1-249ENST00000613886 CNGB1Q14028 1251 aaPredicted RBP12.03□□□□□ -0.48
RUNX1T1-249ENST00000613886 CHIC1Q5VXU3 224 aa12.03□□□□□ -0.48
RUNX1T1-249ENST00000613886 DAXXQ9UER7 740 aaPredicted RBP11.95□□□□□ -0.5
RUNX1T1-249ENST00000613886 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
RUNX1T1-249ENST00000613886 MYT1Q01538 1121 aa11.92□□□□□ -0.5
RUNX1T1-249ENST00000613886 TRIM26Q12899 539 aaPredicted RBP11.91□□□□□ -0.5
RUNX1T1-249ENST00000613886 LOC105371045A0A1W2PR82 267 aa11.85□□□□□ -0.51
RUNX1T1-249ENST00000613886 HRCP23327 699 aa11.79□□□□□ -0.52
RUNX1T1-249ENST00000613886 CLSPNQ9HAW4 1339 aa11.71□□□□□ -0.53
RUNX1T1-249ENST00000613886 FAM50AQ14320 339 aaKnown RBP11.71□□□□□ -0.53
RUNX1T1-249ENST00000613886 TRIM52Q96A61 297 aa11.67□□□□□ -0.54
RUNX1T1-249ENST00000613886 ZNF316A6NFI3 1004 aaPredicted RBP11.66□□□□□ -0.54
RUNX1T1-249ENST00000613886 NEUROD1Q13562 356 aa11.63□□□□□ -0.55
RUNX1T1-249ENST00000613886 PABPN1Q86U42 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
RUNX1T1-249ENST00000613886 DIEXFQ68CQ4 756 aaKnown RBP11.59□□□□□ -0.55
RUNX1T1-249ENST00000613886 ZNF326Q5BKZ1 582 aaKnown RBP11.58□□□□□ -0.56
RUNX1T1-249ENST00000613886 RTL5Q5HYW3 569 aaPredicted RBP11.57□□□□□ -0.56
RUNX1T1-249ENST00000613886 FBLN2P98095 1184 aa11.56□□□□□ -0.56
RUNX1T1-249ENST00000613886 SLC24A1O60721 1099 aa11.56□□□□□ -0.56
RUNX1T1-249ENST00000613886 BCL11AQ9H165 835 aa11.55□□□□□ -0.56
RUNX1T1-249ENST00000613886 BCANQ96GW7 911 aa11.52□□□□□ -0.56
RUNX1T1-249ENST00000613886 ABCC9O60706 1549 aa11.51□□□□□ -0.57
RUNX1T1-249ENST00000613886 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
RUNX1T1-249ENST00000613886 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
RUNX1T1-249ENST00000613886 ANP32CO43423 234 aa11.44□□□□□ -0.58
RUNX1T1-249ENST00000613886 CANXP27824 592 aaKnown RBP11.42□□□□□ -0.58
RUNX1T1-249ENST00000613886 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
RUNX1T1-249ENST00000613886 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
RUNX1T1-249ENST00000613886 NEFMP07197 916 aa11.35□□□□□ -0.59
RUNX1T1-249ENST00000613886 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
RUNX1T1-249ENST00000613886 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
RUNX1T1-249ENST00000613886 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
RUNX1T1-249ENST00000613886 CHGAP10645 457 aaKnown RBP11.26□□□□□ -0.61
RUNX1T1-249ENST00000613886 ESF1Q9H501 851 aaKnown RBP11.26□□□□□ -0.61
RUNX1T1-249ENST00000613886 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
RUNX1T1-249ENST00000613886 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
RUNX1T1-249ENST00000613886 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
RUNX1T1-249ENST00000613886 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
RUNX1T1-249ENST00000613886 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
RUNX1T1-249ENST00000613886 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
RUNX1T1-249ENST00000613886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.63
RUNX1T1-249ENST00000613886 FAM9BQ8IZU0 186 aa11.11□□□□□ -0.63
RUNX1T1-249ENST00000613886 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
RUNX1T1-249ENST00000613886 TONSLQ96HA7 1378 aa11.11□□□□□ -0.63
RUNX1T1-249ENST00000613886 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
RUNX1T1-249ENST00000613886 FKBP8Q14318 412 aa11.09□□□□□ -0.63
RUNX1T1-249ENST00000613886 SENP3Q9H4L4 574 aaPredicted RBP11.09□□□□□ -0.63
RUNX1T1-249ENST00000613886 CHIC2Q9UKJ5 165 aa11.09□□□□□ -0.63
RUNX1T1-249ENST00000613886 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
RUNX1T1-249ENST00000613886 SCRIBQ14160 1630 aa11.07□□□□□ -0.64
RUNX1T1-249ENST00000613886 ACIN1Q9UKV3 1341 aaKnown RBP11.07□□□□□ -0.64
RUNX1T1-249ENST00000613886 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
RUNX1T1-249ENST00000613886 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
RUNX1T1-249ENST00000613886 A0A0G2JS52 829 aa11.06□□□□□ -0.64
RUNX1T1-249ENST00000613886 ANP32BQ92688 251 aaKnown RBP11.06□□□□□ -0.64
RUNX1T1-249ENST00000613886 KDM2AQ9Y2K7 1162 aa11.05□□□□□ -0.64
RUNX1T1-249ENST00000613886 UPF2Q9HAU5 1272 aaKnown RBP11.04□□□□□ -0.64
RUNX1T1-249ENST00000613886 TMC1Q8TDI8 760 aa11.02□□□□□ -0.65
RUNX1T1-249ENST00000613886 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
RUNX1T1-249ENST00000613886 EIF5BO60841 1220 aaKnown RBP11□□□□□ -0.65
RUNX1T1-249ENST00000613886 ARXQ96QS3 562 aa11□□□□□ -0.65
RUNX1T1-249ENST00000613886 WDR43Q15061 677 aaKnown RBP eCLIP10.99□□□□□ -0.65
RUNX1T1-249ENST00000613886 C14orf37Q86TY3 774 aa10.96□□□□□ -0.65
RUNX1T1-249ENST00000613886 CCDC136Q96JN2 1154 aa10.96□□□□□ -0.65
RUNX1T1-249ENST00000613886 HIRIP3Q9BW71 556 aaPredicted RBP10.96□□□□□ -0.66
RUNX1T1-249ENST00000613886 NBR1Q14596 966 aa10.95□□□□□ -0.66
RUNX1T1-249ENST00000613886 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.95□□□□□ -0.66
RUNX1T1-249ENST00000613886 TSPY4P0CV99 314 aa10.94□□□□□ -0.66
RUNX1T1-249ENST00000613886 TSPY10P0CW01 314 aa10.94□□□□□ -0.66
RUNX1T1-249ENST00000613886 IRX6P78412 446 aaPredicted RBP10.93□□□□□ -0.66
RUNX1T1-249ENST00000613886 CHMP7Q8WUX9 453 aaPredicted RBP10.92□□□□□ -0.66
RUNX1T1-249ENST00000613886 MRS2Q9HD23 443 aa10.92□□□□□ -0.66
RUNX1T1-249ENST00000613886 KCNH8Q96L42 1107 aa10.91□□□□□ -0.66
RUNX1T1-249ENST00000613886 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms