RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
PCDH15-233ENST00000621708 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
PCDH15-233ENST00000621708 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
PCDH15-233ENST00000621708 SHROOM4Q9ULL8 1493 aa14.55□□□□□ -0.08
PCDH15-233ENST00000621708 FAM9AQ8IZU1 332 aaPredicted RBP13.9□□□□□ -0.18
PCDH15-233ENST00000621708 APLP2Q06481 763 aa13.85□□□□□ -0.19
PCDH15-233ENST00000621708 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
PCDH15-233ENST00000621708 ABCC9O60706 1549 aa13.72□□□□□ -0.21
PCDH15-233ENST00000621708 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
PCDH15-233ENST00000621708 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
PCDH15-233ENST00000621708 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.26
PCDH15-233ENST00000621708 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
PCDH15-233ENST00000621708 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
PCDH15-233ENST00000621708 ZEB1P37275 1124 aaPredicted RBP13.31□□□□□ -0.28
PCDH15-233ENST00000621708 RANGAP1P46060 587 aaPredicted RBP13.31□□□□□ -0.28
PCDH15-233ENST00000621708 ATP1B4Q9UN42 357 aaPredicted RBP13.29□□□□□ -0.28
PCDH15-233ENST00000621708 CHIC1Q5VXU3 224 aa13.23□□□□□ -0.29
PCDH15-233ENST00000621708 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
PCDH15-233ENST00000621708 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
PCDH15-233ENST00000621708 TTBK1Q5TCY1 1321 aaPredicted RBP13.21□□□□□ -0.29
PCDH15-233ENST00000621708 SCRIBQ14160 1630 aa13.19□□□□□ -0.3
PCDH15-233ENST00000621708 NACADO15069 1562 aa13.17□□□□□ -0.3
PCDH15-233ENST00000621708 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
PCDH15-233ENST00000621708 CCER1Q8TC90 406 aaPredicted RBP13.12□□□□□ -0.31
PCDH15-233ENST00000621708 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
PCDH15-233ENST00000621708 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
PCDH15-233ENST00000621708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
PCDH15-233ENST00000621708 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
PCDH15-233ENST00000621708 LOC105371045A0A1W2PR82 267 aa12.91□□□□□ -0.34
PCDH15-233ENST00000621708 CENPBP07199 599 aaPredicted RBP12.85□□□□□ -0.35
PCDH15-233ENST00000621708 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
PCDH15-233ENST00000621708 PPARGC1BQ86YN6 1023 aaKnown RBP12.82□□□□□ -0.36
PCDH15-233ENST00000621708 CSRNP3Q8WYN3 585 aa12.81□□□□□ -0.36
PCDH15-233ENST00000621708 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
PCDH15-233ENST00000621708 ITGAEP38570 1179 aa12.77□□□□□ -0.37
PCDH15-233ENST00000621708 BAZ1AQ9NRL2 1556 aaPredicted RBP12.75□□□□□ -0.37
PCDH15-233ENST00000621708 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
PCDH15-233ENST00000621708 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
PCDH15-233ENST00000621708 FBLN2P98095 1184 aa12.71□□□□□ -0.38
PCDH15-233ENST00000621708 FAM50AQ14320 339 aaKnown RBP12.67□□□□□ -0.38
PCDH15-233ENST00000621708 EEA1Q15075 1411 aa12.65□□□□□ -0.38
PCDH15-233ENST00000621708 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
PCDH15-233ENST00000621708 HRCP23327 699 aa12.64□□□□□ -0.39
PCDH15-233ENST00000621708 NEFLP07196 543 aa12.6□□□□□ -0.39
PCDH15-233ENST00000621708 TRIM52Q96A61 297 aa12.55□□□□□ -0.4
PCDH15-233ENST00000621708 SMARCA2P51531 1590 aa12.55□□□□□ -0.4
PCDH15-233ENST00000621708 WRNQ14191 1432 aaPredicted RBP eCLIP12.53□□□□□ -0.4
PCDH15-233ENST00000621708 P3H3Q8IVL6 736 aa12.49□□□□□ -0.41
PCDH15-233ENST00000621708 CECR2Q9BXF3 1484 aa12.48□□□□□ -0.41
PCDH15-233ENST00000621708 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
PCDH15-233ENST00000621708 GOLGA3Q08378 1498 aa12.46□□□□□ -0.41
PCDH15-233ENST00000621708 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
PCDH15-233ENST00000621708 POLR3GLQ9BT43 218 aa12.45□□□□□ -0.42
PCDH15-233ENST00000621708 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
PCDH15-233ENST00000621708 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
PCDH15-233ENST00000621708 CLIP1P30622 1438 aa12.4□□□□□ -0.42
PCDH15-233ENST00000621708 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
PCDH15-233ENST00000621708 CEP164Q9UPV0 1460 aa12.4□□□□□ -0.43
PCDH15-233ENST00000621708 YTHDC1Q96MU7 727 aaKnown RBP12.39□□□□□ -0.43
PCDH15-233ENST00000621708 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
PCDH15-233ENST00000621708 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
PCDH15-233ENST00000621708 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
PCDH15-233ENST00000621708 NEUROD1Q13562 356 aa12.35□□□□□ -0.43
PCDH15-233ENST00000621708 ZNF777Q9ULD5 760 aaPredicted RBP12.35□□□□□ -0.43
PCDH15-233ENST00000621708 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
PCDH15-233ENST00000621708 ARID3CA6NKF2 412 aa12.33□□□□□ -0.44
PCDH15-233ENST00000621708 MTUS2Q5JR59 1369 aa12.33□□□□□ -0.44
PCDH15-233ENST00000621708 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.44
PCDH15-233ENST00000621708 CCDC88BA6NC98 1476 aa12.32□□□□□ -0.44
PCDH15-233ENST00000621708 SLC4A1APQ9BWU0 796 aaKnown RBP12.3□□□□□ -0.44
PCDH15-233ENST00000621708 DIEXFQ68CQ4 756 aaKnown RBP12.29□□□□□ -0.44
PCDH15-233ENST00000621708 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
PCDH15-233ENST00000621708 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
PCDH15-233ENST00000621708 ESF1Q9H501 851 aaKnown RBP12.28□□□□□ -0.44
PCDH15-233ENST00000621708 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
PCDH15-233ENST00000621708 TSPY4P0CV99 314 aa12.25□□□□□ -0.45
PCDH15-233ENST00000621708 TSPY10P0CW01 314 aa12.25□□□□□ -0.45
PCDH15-233ENST00000621708 ZNF326Q5BKZ1 582 aaKnown RBP12.23□□□□□ -0.45
PCDH15-233ENST00000621708 CUX2O14529 1486 aa12.23□□□□□ -0.45
PCDH15-233ENST00000621708 ANP32CO43423 234 aa12.23□□□□□ -0.45
PCDH15-233ENST00000621708 PLEKHD1A6NEE1 506 aa12.22□□□□□ -0.45
PCDH15-233ENST00000621708 WIZO95785 1651 aa12.22□□□□□ -0.45
PCDH15-233ENST00000621708 CADPSQ9ULU8 1353 aa12.22□□□□□ -0.45
PCDH15-233ENST00000621708 FHAD1B1AJZ9 1412 aa12.22□□□□□ -0.45
PCDH15-233ENST00000621708 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
PCDH15-233ENST00000621708 TONSLQ96HA7 1378 aa12.21□□□□□ -0.45
PCDH15-233ENST00000621708 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.46
PCDH15-233ENST00000621708 ABCC8Q09428 1581 aa12.17□□□□□ -0.46
PCDH15-233ENST00000621708 SOGA1O94964 1423 aa12.15□□□□□ -0.46
PCDH15-233ENST00000621708 BCANQ96GW7 911 aa12.14□□□□□ -0.47
PCDH15-233ENST00000621708 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
PCDH15-233ENST00000621708 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
PCDH15-233ENST00000621708 CARMIL2Q6F5E8 1435 aa12.1□□□□□ -0.47
PCDH15-233ENST00000621708 NEFMP07197 916 aa12.1□□□□□ -0.47
PCDH15-233ENST00000621708 EIF4G1Q04637 1599 aaKnown RBP12.09□□□□□ -0.47
PCDH15-233ENST00000621708 CHIC2Q9UKJ5 165 aa12.09□□□□□ -0.47
PCDH15-233ENST00000621708 DAXXQ9UER7 740 aaPredicted RBP12.08□□□□□ -0.48
PCDH15-233ENST00000621708 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
PCDH15-233ENST00000621708 CFDP1Q9UEE9 299 aaPredicted RBP12.07□□□□□ -0.48
PCDH15-233ENST00000621708 CHGAP10645 457 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms