RNA–Protein interactions for RNA: ENST00000370563.3

CLCA4-201, Transcript of chloride channel accessory 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCA4, Length 3,211 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA4-201ENST00000370563 CHIC1Q5VXU3 224 aa8.95□□□□□ -0.98
CLCA4-201ENST00000370563 AEBP2Q6ZN18 517 aaPredicted RBP8.24□□□□□ -1.09
CLCA4-201ENST00000370563 PHF23Q9BUL5 403 aaPredicted RBP7.85□□□□□ -1.15
CLCA4-201ENST00000370563 SLC24A1O60721 1099 aa7.83□□□□□ -1.16
CLCA4-201ENST00000370563 EHMT2Q96KQ7 1210 aa7.74□□□□□ -1.17
CLCA4-201ENST00000370563 PLPPR3Q6T4P5 718 aa7.55□□□□□ -1.2
CLCA4-201ENST00000370563 AMER1Q5JTC6 1135 aaPredicted RBP7.4□□□□□ -1.23
CLCA4-201ENST00000370563 KCNA4P22459 653 aa7.32□□□□□ -1.24
CLCA4-201ENST00000370563 CSRNP3Q8WYN3 585 aa7.32□□□□□ -1.24
CLCA4-201ENST00000370563 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
CLCA4-201ENST00000370563 NCBP3Q53F19 620 aaKnown RBP7.2□□□□□ -1.26
CLCA4-201ENST00000370563 SLC4A1APQ9BWU0 796 aaKnown RBP7.05□□□□□ -1.28
CLCA4-201ENST00000370563 DAXXQ9UER7 740 aaPredicted RBP6.99□□□□□ -1.29
CLCA4-201ENST00000370563 SENP3Q9H4L4 574 aaPredicted RBP6.99□□□□□ -1.29
CLCA4-201ENST00000370563 DNAJC5BQ9UF47 199 aa6.98□□□□□ -1.29
CLCA4-201ENST00000370563 ADRA2BP18089 450 aa6.97□□□□□ -1.29
CLCA4-201ENST00000370563 ARXQ96QS3 562 aa6.86□□□□□ -1.31
CLCA4-201ENST00000370563 PRKCSHP14314 528 aaPredicted RBP6.86□□□□□ -1.31
CLCA4-201ENST00000370563 ERICH6Q7L0X2 663 aa6.82□□□□□ -1.32
CLCA4-201ENST00000370563 ZBTB22O15209 634 aa6.79□□□□□ -1.32
CLCA4-201ENST00000370563 BCANQ96GW7 911 aa6.74□□□□□ -1.33
CLCA4-201ENST00000370563 TAOK2Q9UL54 1235 aa6.69□□□□□ -1.34
CLCA4-201ENST00000370563 PLCB2Q00722 1185 aa6.68□□□□□ -1.34
CLCA4-201ENST00000370563 PPP4R3CPQ6ZMV5 832 aa6.67□□□□□ -1.34
CLCA4-201ENST00000370563 VSIG10Q8N0Z9 540 aa6.67□□□□□ -1.34
CLCA4-201ENST00000370563 PPP6R1Q9UPN7 881 aa6.65□□□□□ -1.34
CLCA4-201ENST00000370563 TIMELESSQ9UNS1 1208 aa6.62□□□□□ -1.35
CLCA4-201ENST00000370563 NPM3O75607 178 aaKnown RBP6.61□□□□□ -1.35
CLCA4-201ENST00000370563 FOXD4L1Q9NU39 408 aa6.6□□□□□ -1.35
CLCA4-201ENST00000370563 ATXN8OSP0DMR3 200 aa6.59□□□□□ -1.35
CLCA4-201ENST00000370563 TPRNQ4KMQ1 711 aa6.57□□□□□ -1.36
CLCA4-201ENST00000370563 TULP1O00294 542 aaPredicted RBP6.54□□□□□ -1.36
CLCA4-201ENST00000370563 FKBP8Q14318 412 aa6.54□□□□□ -1.36
CLCA4-201ENST00000370563 HAP1P54257 671 aaPredicted RBP6.53□□□□□ -1.36
CLCA4-201ENST00000370563 HOMEZQ8IX15 550 aa6.5□□□□□ -1.37
CLCA4-201ENST00000370563 CNKSR2Q8WXI2 1034 aa6.44□□□□□ -1.38
CLCA4-201ENST00000370563 DNAJC5Q9H3Z4 198 aa6.4□□□□□ -1.38
CLCA4-201ENST00000370563 GTF3C3Q9Y5Q9 886 aa6.4□□□□□ -1.38
CLCA4-201ENST00000370563 TMEM132AQ24JP5 1023 aa6.37□□□□□ -1.39
CLCA4-201ENST00000370563 KDM2AQ9Y2K7 1162 aa6.35□□□□□ -1.39
CLCA4-201ENST00000370563 BBXQ8WY36 941 aaPredicted RBP6.29□□□□□ -1.4
CLCA4-201ENST00000370563 FBLN2P98095 1184 aa6.29□□□□□ -1.4
CLCA4-201ENST00000370563 RANGAP1P46060 587 aaPredicted RBP6.28□□□□□ -1.4
CLCA4-201ENST00000370563 FOXD1Q16676 465 aa6.27□□□□□ -1.41
CLCA4-201ENST00000370563 APLP2Q06481 763 aa6.27□□□□□ -1.41
CLCA4-201ENST00000370563 TTBK1Q5TCY1 1321 aaPredicted RBP6.27□□□□□ -1.41
CLCA4-201ENST00000370563 FBXO3Q9UK99 471 aa6.25□□□□□ -1.41
CLCA4-201ENST00000370563 PROM2Q8N271 834 aa6.24□□□□□ -1.41
CLCA4-201ENST00000370563 PODXL2Q9NZ53 605 aa6.24□□□□□ -1.41
CLCA4-201ENST00000370563 DCAF8L2P0C7V8 631 aa6.23□□□□□ -1.41
CLCA4-201ENST00000370563 SCAF1Q9H7N4 1312 aaKnown RBP6.2□□□□□ -1.42
CLCA4-201ENST00000370563 C14orf37Q86TY3 774 aa6.2□□□□□ -1.42
CLCA4-201ENST00000370563 RNF216Q9NWF9 866 aaPredicted RBP6.2□□□□□ -1.42
CLCA4-201ENST00000370563 MYCNP04198 464 aaPredicted RBP6.18□□□□□ -1.42
CLCA4-201ENST00000370563 KLHL34Q8N239 644 aa6.18□□□□□ -1.42
CLCA4-201ENST00000370563 MYT1Q01538 1121 aa6.13□□□□□ -1.43
CLCA4-201ENST00000370563 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.13□□□□□ -1.43
CLCA4-201ENST00000370563 PAXIP1Q6ZW49 1069 aaPredicted RBP6.11□□□□□ -1.43
CLCA4-201ENST00000370563 PKD2Q13563 968 aa6.11□□□□□ -1.43
CLCA4-201ENST00000370563 SLC4A2P04920 1241 aa6.09□□□□□ -1.43
CLCA4-201ENST00000370563 CFAP44Q96MT7 982 aa6.09□□□□□ -1.43
CLCA4-201ENST00000370563 SUPT5HO00267 1087 aaKnown RBP6.08□□□□□ -1.44
CLCA4-201ENST00000370563 PELP1Q8IZL8 1130 aaKnown RBP6.08□□□□□ -1.44
CLCA4-201ENST00000370563 NPM2Q86SE8 214 aaKnown RBP6.08□□□□□ -1.44
CLCA4-201ENST00000370563 TSHZ2Q9NRE2 1034 aa6.08□□□□□ -1.44
CLCA4-201ENST00000370563 NPM1P06748 294 aaKnown RBP eCLIP6.06□□□□□ -1.44
CLCA4-201ENST00000370563 NBR1Q14596 966 aa6.05□□□□□ -1.44
CLCA4-201ENST00000370563 TRIM26Q12899 539 aaPredicted RBP6.04□□□□□ -1.44
CLCA4-201ENST00000370563 PIAS4Q8N2W9 510 aaPredicted RBP6.04□□□□□ -1.44
CLCA4-201ENST00000370563 HOXD11P31277 338 aaPredicted RBP6.03□□□□□ -1.44
CLCA4-201ENST00000370563 VASPP50552 380 aaPredicted RBP6.01□□□□□ -1.45
CLCA4-201ENST00000370563 UBTFP17480 764 aaKnown RBP6.01□□□□□ -1.45
CLCA4-201ENST00000370563 IFNLR1Q8IU57 520 aaPredicted RBP6□□□□□ -1.45
CLCA4-201ENST00000370563 HRCP23327 699 aa5.99□□□□□ -1.45
CLCA4-201ENST00000370563 SPRYD3Q8NCJ5 442 aa5.99□□□□□ -1.45
CLCA4-201ENST00000370563 ATF5Q9Y2D1 282 aaPredicted RBP5.89□□□□□ -1.47
CLCA4-201ENST00000370563 POTEDQ86YR6 584 aa5.89□□□□□ -1.47
CLCA4-201ENST00000370563 ECM2O94769 699 aaPredicted RBP5.86□□□□□ -1.47
CLCA4-201ENST00000370563 MAPK8IP2Q13387 824 aaPredicted RBP5.86□□□□□ -1.47
CLCA4-201ENST00000370563 SPOCK2Q92563 424 aa5.86□□□□□ -1.47
CLCA4-201ENST00000370563 TRIM41Q8WV44 630 aa5.85□□□□□ -1.47
CLCA4-201ENST00000370563 RGL2O15211 777 aa5.84□□□□□ -1.48
CLCA4-201ENST00000370563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.83□□□□□ -1.48
CLCA4-201ENST00000370563 HNRNPUL2Q1KMD3 747 aaKnown RBP5.83□□□□□ -1.48
CLCA4-201ENST00000370563 HS6ST3Q8IZP7 471 aa5.83□□□□□ -1.48
CLCA4-201ENST00000370563 BRPF1P55201 1214 aaPredicted RBP5.83□□□□□ -1.48
CLCA4-201ENST00000370563 LOC105371045A0A1W2PR82 267 aa5.82□□□□□ -1.48
CLCA4-201ENST00000370563 SPDYE4A6NLX3 237 aa5.82□□□□□ -1.48
CLCA4-201ENST00000370563 TRHP20396 242 aaPredicted RBP5.82□□□□□ -1.48
CLCA4-201ENST00000370563 SAMD1Q6SPF0 538 aaPredicted RBP5.8□□□□□ -1.48
CLCA4-201ENST00000370563 ZMYND15Q9H091 742 aa5.8□□□□□ -1.48
CLCA4-201ENST00000370563 SHROOM4Q9ULL8 1493 aa5.77□□□□□ -1.49
CLCA4-201ENST00000370563 CHGAP10645 457 aaKnown RBP5.77□□□□□ -1.49
CLCA4-201ENST00000370563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLCA4-201ENST00000370563 DMRT2Q9Y5R5 561 aa5.77□□□□□ -1.49
CLCA4-201ENST00000370563 RSPH6AQ9H0K4 717 aa5.76□□□□□ -1.49
CLCA4-201ENST00000370563 CCDC9Q9Y3X0 531 aaKnown RBP5.76□□□□□ -1.49
CLCA4-201ENST00000370563 EIF5BO60841 1220 aaKnown RBP5.76□□□□□ -1.49
CLCA4-201ENST00000370563 P3H3Q8IVL6 736 aa5.74□□□□□ -1.49
CLCA4-201ENST00000370563 SGIP1Q9BQI5 828 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms