RNA–Protein interactions for RNA: ENST00000370563.3

CLCA4-201, Transcript of chloride channel accessory 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCA4, Length 3,211 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA4-201ENST00000370563 CHIC1Q5VXU3 224 aa8.95□□□□□ -0.98
CLCA4-201ENST00000370563 AEBP2Q6ZN18 517 aaPredicted RBP8.24□□□□□ -1.09
CLCA4-201ENST00000370563 PHF23Q9BUL5 403 aaPredicted RBP7.85□□□□□ -1.15
CLCA4-201ENST00000370563 SLC24A1O60721 1099 aa7.83□□□□□ -1.16
CLCA4-201ENST00000370563 EHMT2Q96KQ7 1210 aa7.74□□□□□ -1.17
CLCA4-201ENST00000370563 PLPPR3Q6T4P5 718 aa7.55□□□□□ -1.2
CLCA4-201ENST00000370563 AMER1Q5JTC6 1135 aaPredicted RBP7.4□□□□□ -1.23
CLCA4-201ENST00000370563 KCNA4P22459 653 aa7.32□□□□□ -1.24
CLCA4-201ENST00000370563 CSRNP3Q8WYN3 585 aa7.32□□□□□ -1.24
CLCA4-201ENST00000370563 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
CLCA4-201ENST00000370563 NCBP3Q53F19 620 aaKnown RBP7.2□□□□□ -1.26
CLCA4-201ENST00000370563 SLC4A1APQ9BWU0 796 aaKnown RBP7.05□□□□□ -1.28
CLCA4-201ENST00000370563 DAXXQ9UER7 740 aaPredicted RBP6.99□□□□□ -1.29
CLCA4-201ENST00000370563 SENP3Q9H4L4 574 aaPredicted RBP6.99□□□□□ -1.29
CLCA4-201ENST00000370563 DNAJC5BQ9UF47 199 aa6.98□□□□□ -1.29
CLCA4-201ENST00000370563 ADRA2BP18089 450 aa6.97□□□□□ -1.29
CLCA4-201ENST00000370563 ARXQ96QS3 562 aa6.86□□□□□ -1.31
CLCA4-201ENST00000370563 PRKCSHP14314 528 aaPredicted RBP6.86□□□□□ -1.31
CLCA4-201ENST00000370563 ERICH6Q7L0X2 663 aa6.82□□□□□ -1.32
CLCA4-201ENST00000370563 ZBTB22O15209 634 aa6.79□□□□□ -1.32
CLCA4-201ENST00000370563 BCANQ96GW7 911 aa6.74□□□□□ -1.33
CLCA4-201ENST00000370563 TAOK2Q9UL54 1235 aa6.69□□□□□ -1.34
CLCA4-201ENST00000370563 PLCB2Q00722 1185 aa6.68□□□□□ -1.34
CLCA4-201ENST00000370563 PPP4R3CPQ6ZMV5 832 aa6.67□□□□□ -1.34
CLCA4-201ENST00000370563 VSIG10Q8N0Z9 540 aa6.67□□□□□ -1.34
CLCA4-201ENST00000370563 PPP6R1Q9UPN7 881 aa6.65□□□□□ -1.34
CLCA4-201ENST00000370563 TIMELESSQ9UNS1 1208 aa6.62□□□□□ -1.35
CLCA4-201ENST00000370563 NPM3O75607 178 aaKnown RBP6.61□□□□□ -1.35
CLCA4-201ENST00000370563 FOXD4L1Q9NU39 408 aa6.6□□□□□ -1.35
CLCA4-201ENST00000370563 ATXN8OSP0DMR3 200 aa6.59□□□□□ -1.35
CLCA4-201ENST00000370563 TPRNQ4KMQ1 711 aa6.57□□□□□ -1.36
CLCA4-201ENST00000370563 TULP1O00294 542 aaPredicted RBP6.54□□□□□ -1.36
CLCA4-201ENST00000370563 FKBP8Q14318 412 aa6.54□□□□□ -1.36
CLCA4-201ENST00000370563 HAP1P54257 671 aaPredicted RBP6.53□□□□□ -1.36
CLCA4-201ENST00000370563 HOMEZQ8IX15 550 aa6.5□□□□□ -1.37
CLCA4-201ENST00000370563 CNKSR2Q8WXI2 1034 aa6.44□□□□□ -1.38
CLCA4-201ENST00000370563 DNAJC5Q9H3Z4 198 aa6.4□□□□□ -1.38
CLCA4-201ENST00000370563 GTF3C3Q9Y5Q9 886 aa6.4□□□□□ -1.38
CLCA4-201ENST00000370563 TMEM132AQ24JP5 1023 aa6.37□□□□□ -1.39
CLCA4-201ENST00000370563 KDM2AQ9Y2K7 1162 aa6.35□□□□□ -1.39
CLCA4-201ENST00000370563 BBXQ8WY36 941 aaPredicted RBP6.29□□□□□ -1.4
CLCA4-201ENST00000370563 FBLN2P98095 1184 aa6.29□□□□□ -1.4
CLCA4-201ENST00000370563 RANGAP1P46060 587 aaPredicted RBP6.28□□□□□ -1.4
CLCA4-201ENST00000370563 FOXD1Q16676 465 aa6.27□□□□□ -1.41
CLCA4-201ENST00000370563 APLP2Q06481 763 aa6.27□□□□□ -1.41
CLCA4-201ENST00000370563 TTBK1Q5TCY1 1321 aaPredicted RBP6.27□□□□□ -1.41
CLCA4-201ENST00000370563 FBXO3Q9UK99 471 aa6.25□□□□□ -1.41
CLCA4-201ENST00000370563 PROM2Q8N271 834 aa6.24□□□□□ -1.41
CLCA4-201ENST00000370563 PODXL2Q9NZ53 605 aa6.24□□□□□ -1.41
CLCA4-201ENST00000370563 DCAF8L2P0C7V8 631 aa6.23□□□□□ -1.41
CLCA4-201ENST00000370563 SCAF1Q9H7N4 1312 aaKnown RBP6.2□□□□□ -1.42
CLCA4-201ENST00000370563 C14orf37Q86TY3 774 aa6.2□□□□□ -1.42
CLCA4-201ENST00000370563 RNF216Q9NWF9 866 aaPredicted RBP6.2□□□□□ -1.42
CLCA4-201ENST00000370563 MYCNP04198 464 aaPredicted RBP6.18□□□□□ -1.42
CLCA4-201ENST00000370563 KLHL34Q8N239 644 aa6.18□□□□□ -1.42
CLCA4-201ENST00000370563 MYT1Q01538 1121 aa6.13□□□□□ -1.43
CLCA4-201ENST00000370563 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.13□□□□□ -1.43
CLCA4-201ENST00000370563 PAXIP1Q6ZW49 1069 aaPredicted RBP6.11□□□□□ -1.43
CLCA4-201ENST00000370563 PKD2Q13563 968 aa6.11□□□□□ -1.43
CLCA4-201ENST00000370563 SLC4A2P04920 1241 aa6.09□□□□□ -1.43
CLCA4-201ENST00000370563 CFAP44Q96MT7 982 aa6.09□□□□□ -1.43
CLCA4-201ENST00000370563 SUPT5HO00267 1087 aaKnown RBP6.08□□□□□ -1.44
CLCA4-201ENST00000370563 PELP1Q8IZL8 1130 aaKnown RBP6.08□□□□□ -1.44
CLCA4-201ENST00000370563 NPM2Q86SE8 214 aaKnown RBP6.08□□□□□ -1.44
CLCA4-201ENST00000370563 TSHZ2Q9NRE2 1034 aa6.08□□□□□ -1.44
CLCA4-201ENST00000370563 NPM1P06748 294 aaKnown RBP eCLIP6.06□□□□□ -1.44
CLCA4-201ENST00000370563 NBR1Q14596 966 aa6.05□□□□□ -1.44
CLCA4-201ENST00000370563 TRIM26Q12899 539 aaPredicted RBP6.04□□□□□ -1.44
CLCA4-201ENST00000370563 PIAS4Q8N2W9 510 aaPredicted RBP6.04□□□□□ -1.44
CLCA4-201ENST00000370563 HOXD11P31277 338 aaPredicted RBP6.03□□□□□ -1.44
CLCA4-201ENST00000370563 VASPP50552 380 aaPredicted RBP6.01□□□□□ -1.45
CLCA4-201ENST00000370563 UBTFP17480 764 aaKnown RBP6.01□□□□□ -1.45
CLCA4-201ENST00000370563 IFNLR1Q8IU57 520 aaPredicted RBP6□□□□□ -1.45
CLCA4-201ENST00000370563 HRCP23327 699 aa5.99□□□□□ -1.45
CLCA4-201ENST00000370563 SPRYD3Q8NCJ5 442 aa5.99□□□□□ -1.45
CLCA4-201ENST00000370563 ATF5Q9Y2D1 282 aaPredicted RBP5.89□□□□□ -1.47
CLCA4-201ENST00000370563 POTEDQ86YR6 584 aa5.89□□□□□ -1.47
CLCA4-201ENST00000370563 ECM2O94769 699 aaPredicted RBP5.86□□□□□ -1.47
CLCA4-201ENST00000370563 MAPK8IP2Q13387 824 aaPredicted RBP5.86□□□□□ -1.47
CLCA4-201ENST00000370563 SPOCK2Q92563 424 aa5.86□□□□□ -1.47
CLCA4-201ENST00000370563 TRIM41Q8WV44 630 aa5.85□□□□□ -1.47
CLCA4-201ENST00000370563 RGL2O15211 777 aa5.84□□□□□ -1.48
CLCA4-201ENST00000370563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.83□□□□□ -1.48
CLCA4-201ENST00000370563 HNRNPUL2Q1KMD3 747 aaKnown RBP5.83□□□□□ -1.48
CLCA4-201ENST00000370563 HS6ST3Q8IZP7 471 aa5.83□□□□□ -1.48
CLCA4-201ENST00000370563 BRPF1P55201 1214 aaPredicted RBP5.83□□□□□ -1.48
CLCA4-201ENST00000370563 LOC105371045A0A1W2PR82 267 aa5.82□□□□□ -1.48
CLCA4-201ENST00000370563 SPDYE4A6NLX3 237 aa5.82□□□□□ -1.48
CLCA4-201ENST00000370563 TRHP20396 242 aaPredicted RBP5.82□□□□□ -1.48
CLCA4-201ENST00000370563 SAMD1Q6SPF0 538 aaPredicted RBP5.8□□□□□ -1.48
CLCA4-201ENST00000370563 ZMYND15Q9H091 742 aa5.8□□□□□ -1.48
CLCA4-201ENST00000370563 SHROOM4Q9ULL8 1493 aa5.77□□□□□ -1.49
CLCA4-201ENST00000370563 CHGAP10645 457 aaKnown RBP5.77□□□□□ -1.49
CLCA4-201ENST00000370563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLCA4-201ENST00000370563 DMRT2Q9Y5R5 561 aa5.77□□□□□ -1.49
CLCA4-201ENST00000370563 RSPH6AQ9H0K4 717 aa5.76□□□□□ -1.49
CLCA4-201ENST00000370563 CCDC9Q9Y3X0 531 aaKnown RBP5.76□□□□□ -1.49
CLCA4-201ENST00000370563 EIF5BO60841 1220 aaKnown RBP5.76□□□□□ -1.49
CLCA4-201ENST00000370563 P3H3Q8IVL6 736 aa5.74□□□□□ -1.49
CLCA4-201ENST00000370563 SGIP1Q9BQI5 828 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms