RNA–Protein interactions for RNA: ENST00000376042.5

CCNB3-204, Transcript of cyclin B3, human

APPRIS P1 TSL 2 BASIC

Gene CCNB3, Length 4,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB3-204	ENST00000376042	NISCH	Q9Y2I1	1504 aa		15.61	■□□□□ 0.09
CCNB3-204	ENST00000376042	DCAF8L2	P0C7V8	631 aa		14.45	□□□□□ -0.1
CCNB3-204	ENST00000376042	ABCC9	O60706	1549 aa		13.54	□□□□□ -0.24
CCNB3-204	ENST00000376042	CCDC180	Q9P1Z9	1646 aa		13.44	□□□□□ -0.26
CCNB3-204	ENST00000376042	SHROOM4	Q9ULL8	1493 aa		13.36	□□□□□ -0.27
CCNB3-204	ENST00000376042	SUPT5H	O00267	1087 aa	Known RBP	13.14	□□□□□ -0.31
CCNB3-204	ENST00000376042	PABPN1	Q86U42	306 aa	Known RBP eCLIP	13	□□□□□ -0.33
CCNB3-204	ENST00000376042	RB1CC1	Q8TDY2	1594 aa		12.99	□□□□□ -0.33
CCNB3-204	ENST00000376042	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.94	□□□□□ -0.34
CCNB3-204	ENST00000376042	NACAD	O15069	1562 aa		12.94	□□□□□ -0.34
CCNB3-204	ENST00000376042	DCAF1	Q9Y4B6	1507 aa		12.75	□□□□□ -0.37
CCNB3-204	ENST00000376042	SCRIB	Q14160	1630 aa		12.71	□□□□□ -0.38
CCNB3-204	ENST00000376042	MYO15B	Q96JP2	1530 aa		12.67	□□□□□ -0.38
CCNB3-204	ENST00000376042	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.65	□□□□□ -0.38
CCNB3-204	ENST00000376042	TRIM41	Q8WV44	630 aa		12.43	□□□□□ -0.42
CCNB3-204	ENST00000376042	APLP2	Q06481	763 aa		12.27	□□□□□ -0.44
CCNB3-204	ENST00000376042	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.26	□□□□□ -0.45
CCNB3-204	ENST00000376042	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.24	□□□□□ -0.45
CCNB3-204	ENST00000376042	EHMT2	Q96KQ7	1210 aa		12.19	□□□□□ -0.46
CCNB3-204	ENST00000376042	SMARCA2	P51531	1590 aa		12.16	□□□□□ -0.46
CCNB3-204	ENST00000376042	UBTF	P17480	764 aa	Known RBP	12.15	□□□□□ -0.46
CCNB3-204	ENST00000376042	RSF1	Q96T23	1441 aa	Predicted RBP	12.13	□□□□□ -0.47
CCNB3-204	ENST00000376042	CECR2	Q9BXF3	1484 aa		12.13	□□□□□ -0.47
CCNB3-204	ENST00000376042	ERCC6	Q03468	1493 aa		12.09	□□□□□ -0.47
CCNB3-204	ENST00000376042	RANGAP1	P46060	587 aa	Predicted RBP	12.03	□□□□□ -0.48
CCNB3-204	ENST00000376042	FBLN2	P98095	1184 aa		12.03	□□□□□ -0.48
CCNB3-204	ENST00000376042	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.03	□□□□□ -0.48
CCNB3-204	ENST00000376042	PDS5B	Q9NTI5	1447 aa		12.01	□□□□□ -0.49
CCNB3-204	ENST00000376042	ATAD2B	Q9ULI0	1458 aa		11.98	□□□□□ -0.49
CCNB3-204	ENST00000376042	EIF4G1	Q04637	1599 aa	Known RBP	11.96	□□□□□ -0.5
CCNB3-204	ENST00000376042	MROH2B	Q7Z745	1585 aa		11.95	□□□□□ -0.5
CCNB3-204	ENST00000376042	CHIC1	Q5VXU3	224 aa		11.95	□□□□□ -0.5
CCNB3-204	ENST00000376042	SMARCA4	P51532	1647 aa		11.93	□□□□□ -0.5
CCNB3-204	ENST00000376042	NCAPD3	P42695	1498 aa		11.92	□□□□□ -0.5
CCNB3-204	ENST00000376042	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.91	□□□□□ -0.5
CCNB3-204	ENST00000376042	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.91	□□□□□ -0.5
CCNB3-204	ENST00000376042	CADPS	Q9ULU8	1353 aa		11.9	□□□□□ -0.51
CCNB3-204	ENST00000376042	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.89	□□□□□ -0.51
CCNB3-204	ENST00000376042	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.86	□□□□□ -0.51
CCNB3-204	ENST00000376042	TOP2A	P11388	1531 aa	Known RBP	11.85	□□□□□ -0.51
CCNB3-204	ENST00000376042	BICRA	Q9NZM4	1560 aa		11.84	□□□□□ -0.51
CCNB3-204	ENST00000376042	CSRNP3	Q8WYN3	585 aa		11.82	□□□□□ -0.52
CCNB3-204	ENST00000376042	CC2D2A	Q9P2K1	1620 aa		11.81	□□□□□ -0.52
CCNB3-204	ENST00000376042	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.79	□□□□□ -0.52
CCNB3-204	ENST00000376042	NPM1	P06748	294 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
CCNB3-204	ENST00000376042	CCDC88B	A6NC98	1476 aa		11.79	□□□□□ -0.52
CCNB3-204	ENST00000376042	CEP164	Q9UPV0	1460 aa		11.76	□□□□□ -0.53
CCNB3-204	ENST00000376042	HMGXB3	Q12766	1538 aa		11.75	□□□□□ -0.53
CCNB3-204	ENST00000376042	ABCC8	Q09428	1581 aa		11.75	□□□□□ -0.53
CCNB3-204	ENST00000376042	MYT1L	Q9UL68	1186 aa		11.74	□□□□□ -0.53
CCNB3-204	ENST00000376042	WIZ	O95785	1651 aa		11.73	□□□□□ -0.53
CCNB3-204	ENST00000376042	DNAJC5B	Q9UF47	199 aa		11.72	□□□□□ -0.53
CCNB3-204	ENST00000376042	KIF27	Q86VH2	1401 aa		11.71	□□□□□ -0.53
CCNB3-204	ENST00000376042	EEA1	Q15075	1411 aa		11.7	□□□□□ -0.54
CCNB3-204	ENST00000376042	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.69	□□□□□ -0.54
CCNB3-204	ENST00000376042	FANCD2	Q9BXW9	1451 aa		11.69	□□□□□ -0.54
CCNB3-204	ENST00000376042	SOGA1	O94964	1423 aa		11.65	□□□□□ -0.54
CCNB3-204	ENST00000376042	UNC13A	Q9UPW8	1703 aa		11.62	□□□□□ -0.55
CCNB3-204	ENST00000376042	CUX2	O14529	1486 aa		11.58	□□□□□ -0.55
CCNB3-204	ENST00000376042	CFTR	P13569	1480 aa		11.57	□□□□□ -0.56
CCNB3-204	ENST00000376042	P3H3	Q8IVL6	736 aa		11.56	□□□□□ -0.56
CCNB3-204	ENST00000376042	LOC105371045	A0A1W2PR82	267 aa		11.56	□□□□□ -0.56
CCNB3-204	ENST00000376042	MRC2	Q9UBG0	1479 aa		11.55	□□□□□ -0.56
CCNB3-204	ENST00000376042	LAMC3	Q9Y6N6	1575 aa		11.53	□□□□□ -0.56
CCNB3-204	ENST00000376042	TDRD9	Q8NDG6	1382 aa	Known RBP	11.53	□□□□□ -0.56
CCNB3-204	ENST00000376042	OSCAR	Q8IYS5	282 aa		11.53	□□□□□ -0.56
CCNB3-204	ENST00000376042	PEG3	Q9GZU2	1588 aa		11.52	□□□□□ -0.56
CCNB3-204	ENST00000376042	CARMIL1	Q5VZK9	1371 aa		11.52	□□□□□ -0.56
CCNB3-204	ENST00000376042	CARMIL2	Q6F5E8	1435 aa		11.47	□□□□□ -0.57
CCNB3-204	ENST00000376042	NES	P48681	1621 aa		11.47	□□□□□ -0.57
CCNB3-204	ENST00000376042	GOLGA3	Q08378	1498 aa		11.46	□□□□□ -0.58
CCNB3-204	ENST00000376042	IFT140	Q96RY7	1462 aa		11.46	□□□□□ -0.58
CCNB3-204	ENST00000376042	ARID3C	A6NKF2	412 aa		11.44	□□□□□ -0.58
CCNB3-204	ENST00000376042	PLEKHD1	A6NEE1	506 aa		11.43	□□□□□ -0.58
CCNB3-204	ENST00000376042	FGD5	Q6ZNL6	1462 aa		11.41	□□□□□ -0.58
CCNB3-204	ENST00000376042	FAM50A	Q14320	339 aa	Known RBP	11.4	□□□□□ -0.58
CCNB3-204	ENST00000376042	ITGAE	P38570	1179 aa		11.39	□□□□□ -0.59
CCNB3-204	ENST00000376042	ESF1	Q9H501	851 aa	Known RBP	11.39	□□□□□ -0.59
CCNB3-204	ENST00000376042	GAPVD1	Q14C86	1478 aa		11.39	□□□□□ -0.59
CCNB3-204	ENST00000376042	CLIP1	P30622	1438 aa		11.37	□□□□□ -0.59
CCNB3-204	ENST00000376042	TRH	P20396	242 aa	Predicted RBP	11.36	□□□□□ -0.59
CCNB3-204	ENST00000376042	GRIN2B	Q13224	1484 aa		11.36	□□□□□ -0.59
CCNB3-204	ENST00000376042	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.35	□□□□□ -0.59
CCNB3-204	ENST00000376042	TOPBP1	Q92547	1522 aa		11.35	□□□□□ -0.59
CCNB3-204	ENST00000376042	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.35	□□□□□ -0.59
CCNB3-204	ENST00000376042	JPH4	Q96JJ6	628 aa		11.34	□□□□□ -0.59
CCNB3-204	ENST00000376042	RAPGEF2	Q9Y4G8	1499 aa		11.34	□□□□□ -0.59
CCNB3-204	ENST00000376042	DNMBP	Q6XZF7	1577 aa		11.33	□□□□□ -0.59
CCNB3-204	ENST00000376042	MTUS2	Q5JR59	1369 aa		11.33	□□□□□ -0.6
CCNB3-204	ENST00000376042	TNIK	Q9UKE5	1360 aa		11.33	□□□□□ -0.6
CCNB3-204	ENST00000376042	KCNH8	Q96L42	1107 aa		11.32	□□□□□ -0.6
CCNB3-204	ENST00000376042	RAD54L2	Q9Y4B4	1467 aa		11.32	□□□□□ -0.6
CCNB3-204	ENST00000376042	FHAD1	B1AJZ9	1412 aa		11.31	□□□□□ -0.6
CCNB3-204	ENST00000376042	PCGF6	Q9BYE7	350 aa		11.3	□□□□□ -0.6
CCNB3-204	ENST00000376042	AQR	O60306	1485 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
CCNB3-204	ENST00000376042	TRIM26	Q12899	539 aa	Predicted RBP	11.3	□□□□□ -0.6
CCNB3-204	ENST00000376042	TSPY4	P0CV99	314 aa		11.28	□□□□□ -0.6
CCNB3-204	ENST00000376042	TSPY10	P0CW01	314 aa		11.28	□□□□□ -0.6
CCNB3-204	ENST00000376042	CCER1	Q8TC90	406 aa	Predicted RBP	11.28	□□□□□ -0.6
CCNB3-204	ENST00000376042	POLA1	P09884	1462 aa	Predicted RBP	11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms