RNA–Protein interactions for RNA: ENST00000428649.4

SPATA31A3-201, Transcript of SPATA31 subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPATA31A3, Length 4,256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA31A3-201ENST00000428649 NISCHQ9Y2I1 1504 aa16.39■□□□□ 0.21
SPATA31A3-201ENST00000428649 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
SPATA31A3-201ENST00000428649 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
SPATA31A3-201ENST00000428649 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
SPATA31A3-201ENST00000428649 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
SPATA31A3-201ENST00000428649 ABCC9O60706 1549 aa14.08□□□□□ -0.16
SPATA31A3-201ENST00000428649 FAM9AQ8IZU1 332 aaPredicted RBP13.93□□□□□ -0.18
SPATA31A3-201ENST00000428649 PABPN1Q86U42 306 aaKnown RBP eCLIP13.79□□□□□ -0.2
SPATA31A3-201ENST00000428649 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
SPATA31A3-201ENST00000428649 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
SPATA31A3-201ENST00000428649 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
SPATA31A3-201ENST00000428649 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
SPATA31A3-201ENST00000428649 TTBK1Q5TCY1 1321 aaPredicted RBP13.57□□□□□ -0.24
SPATA31A3-201ENST00000428649 CHIC1Q5VXU3 224 aa13.5□□□□□ -0.25
SPATA31A3-201ENST00000428649 SCRIBQ14160 1630 aa13.45□□□□□ -0.26
SPATA31A3-201ENST00000428649 LOC105371045A0A1W2PR82 267 aa13.42□□□□□ -0.26
SPATA31A3-201ENST00000428649 PCGF6Q9BYE7 350 aa13.4□□□□□ -0.26
SPATA31A3-201ENST00000428649 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
SPATA31A3-201ENST00000428649 APLP2Q06481 763 aa13.36□□□□□ -0.27
SPATA31A3-201ENST00000428649 PPARGC1BQ86YN6 1023 aaKnown RBP13.33□□□□□ -0.28
SPATA31A3-201ENST00000428649 ATP1B4Q9UN42 357 aaPredicted RBP13.26□□□□□ -0.29
SPATA31A3-201ENST00000428649 RB1CC1Q8TDY2 1594 aa13.13□□□□□ -0.31
SPATA31A3-201ENST00000428649 NACADO15069 1562 aa13.08□□□□□ -0.32
SPATA31A3-201ENST00000428649 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.33
SPATA31A3-201ENST00000428649 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
SPATA31A3-201ENST00000428649 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
SPATA31A3-201ENST00000428649 CCER1Q8TC90 406 aaPredicted RBP12.95□□□□□ -0.34
SPATA31A3-201ENST00000428649 ITGAEP38570 1179 aa12.9□□□□□ -0.34
SPATA31A3-201ENST00000428649 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
SPATA31A3-201ENST00000428649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
SPATA31A3-201ENST00000428649 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
SPATA31A3-201ENST00000428649 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
SPATA31A3-201ENST00000428649 FBLN2P98095 1184 aa12.81□□□□□ -0.36
SPATA31A3-201ENST00000428649 MROH2BQ7Z745 1585 aa12.78□□□□□ -0.36
SPATA31A3-201ENST00000428649 P3H3Q8IVL6 736 aa12.77□□□□□ -0.36
SPATA31A3-201ENST00000428649 MYO15BQ96JP2 1530 aa12.74□□□□□ -0.37
SPATA31A3-201ENST00000428649 BAZ1AQ9NRL2 1556 aaPredicted RBP12.74□□□□□ -0.37
SPATA31A3-201ENST00000428649 BAZ1BQ9UIG0 1483 aaKnown RBP12.73□□□□□ -0.37
SPATA31A3-201ENST00000428649 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
SPATA31A3-201ENST00000428649 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
SPATA31A3-201ENST00000428649 HRCP23327 699 aa12.64□□□□□ -0.39
SPATA31A3-201ENST00000428649 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
SPATA31A3-201ENST00000428649 WIZO95785 1651 aa12.6□□□□□ -0.39
SPATA31A3-201ENST00000428649 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.39
SPATA31A3-201ENST00000428649 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
SPATA31A3-201ENST00000428649 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
SPATA31A3-201ENST00000428649 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
SPATA31A3-201ENST00000428649 SOGA1O94964 1423 aa12.47□□□□□ -0.41
SPATA31A3-201ENST00000428649 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.42
SPATA31A3-201ENST00000428649 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
SPATA31A3-201ENST00000428649 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
SPATA31A3-201ENST00000428649 YTHDC1Q96MU7 727 aaKnown RBP12.42□□□□□ -0.42
SPATA31A3-201ENST00000428649 TOP2AP11388 1531 aaKnown RBP12.41□□□□□ -0.42
SPATA31A3-201ENST00000428649 TRIM52Q96A61 297 aa12.4□□□□□ -0.42
SPATA31A3-201ENST00000428649 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
SPATA31A3-201ENST00000428649 CLIP1P30622 1438 aa12.4□□□□□ -0.43
SPATA31A3-201ENST00000428649 NEUROD1Q13562 356 aa12.39□□□□□ -0.43
SPATA31A3-201ENST00000428649 ZNF777Q9ULD5 760 aaPredicted RBP12.38□□□□□ -0.43
SPATA31A3-201ENST00000428649 CEP162Q5TB80 1403 aa12.37□□□□□ -0.43
SPATA31A3-201ENST00000428649 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
SPATA31A3-201ENST00000428649 KIF27Q86VH2 1401 aa12.36□□□□□ -0.43
SPATA31A3-201ENST00000428649 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
SPATA31A3-201ENST00000428649 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
SPATA31A3-201ENST00000428649 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
SPATA31A3-201ENST00000428649 EEA1Q15075 1411 aa12.33□□□□□ -0.43
SPATA31A3-201ENST00000428649 CUX2O14529 1486 aa12.32□□□□□ -0.44
SPATA31A3-201ENST00000428649 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
SPATA31A3-201ENST00000428649 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
SPATA31A3-201ENST00000428649 TNIKQ9UKE5 1360 aa12.28□□□□□ -0.44
SPATA31A3-201ENST00000428649 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
SPATA31A3-201ENST00000428649 CHIC2Q9UKJ5 165 aa12.26□□□□□ -0.45
SPATA31A3-201ENST00000428649 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
SPATA31A3-201ENST00000428649 CDK11AQ9UQ88 783 aaPredicted RBP12.25□□□□□ -0.45
SPATA31A3-201ENST00000428649 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
SPATA31A3-201ENST00000428649 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
SPATA31A3-201ENST00000428649 CENPBP07199 599 aaPredicted RBP12.24□□□□□ -0.45
SPATA31A3-201ENST00000428649 ZNF326Q5BKZ1 582 aaKnown RBP12.23□□□□□ -0.45
SPATA31A3-201ENST00000428649 DNAJC5BQ9UF47 199 aa12.22□□□□□ -0.45
SPATA31A3-201ENST00000428649 MTUS2Q5JR59 1369 aa12.22□□□□□ -0.45
SPATA31A3-201ENST00000428649 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.45
SPATA31A3-201ENST00000428649 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
SPATA31A3-201ENST00000428649 DIEXFQ68CQ4 756 aaKnown RBP12.2□□□□□ -0.46
SPATA31A3-201ENST00000428649 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
SPATA31A3-201ENST00000428649 KCNH8Q96L42 1107 aa12.16□□□□□ -0.46
SPATA31A3-201ENST00000428649 FANCD2Q9BXW9 1451 aa12.15□□□□□ -0.47
SPATA31A3-201ENST00000428649 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
SPATA31A3-201ENST00000428649 RRP7BPQ9NSQ0 103 aa12.11□□□□□ -0.47
SPATA31A3-201ENST00000428649 RAPGEF2Q9Y4G8 1499 aa12.11□□□□□ -0.47
SPATA31A3-201ENST00000428649 KANK4Q5T7N3 995 aaPredicted RBP12.11□□□□□ -0.47
SPATA31A3-201ENST00000428649 UNC13AQ9UPW8 1703 aa12.1□□□□□ -0.47
SPATA31A3-201ENST00000428649 NESP48681 1621 aa12.1□□□□□ -0.47
SPATA31A3-201ENST00000428649 CC2D2AQ9P2K1 1620 aa12.07□□□□□ -0.48
SPATA31A3-201ENST00000428649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
SPATA31A3-201ENST00000428649 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
SPATA31A3-201ENST00000428649 RAD54L2Q9Y4B4 1467 aa12.06□□□□□ -0.48
SPATA31A3-201ENST00000428649 ZNF316A6NFI3 1004 aaPredicted RBP12.06□□□□□ -0.48
SPATA31A3-201ENST00000428649 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
SPATA31A3-201ENST00000428649 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
SPATA31A3-201ENST00000428649 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
SPATA31A3-201ENST00000428649 FGD5Q6ZNL6 1462 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms