Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 Y_RNA.99-201ENST00000363138 105 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 RNA5SP260-201ENST00000363849 111 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU4-33P-201ENST00000364316 85 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 MIR95-201ENST00000385072 81 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 SUMO2P12-201ENST00000405924 140 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU6-994P-201ENST00000410507 111 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 RN7SL269P-201ENST00000467795 305 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 RN7SL549P-201ENST00000478997 282 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 CYCSP25-201ENST00000525280 316 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 TVP23BP1-201ENST00000557500 617 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 TUBAP4-201ENST00000569261 416 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 MIR5095-201ENST00000578844 88 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 AC007318.2-201ENST00000620999 243 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 AC131009.3-201ENST00000621809 287 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
KRTAP3-3Q9BYR6 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
KRTAP3-3Q9BYR6 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
KRTAP3-3Q9BYR6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
KRTAP3-3Q9BYR6 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
KRTAP3-3Q9BYR6 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 AC107980.1-201ENST00000558671 3355 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 SNORA70.8-201ENST00000384231 136 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 SNORA75.1-201ENST00000391130 148 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 RNU6-935P-201ENST00000410371 100 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 HMGN2P35-201ENST00000412164 270 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 CICP10-201ENST00000439497 198 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 AL133547.1-201ENST00000448546 220 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 CKS1BP2-201ENST00000497342 240 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 SNORA48.11-201ENST00000517015 89 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 MIR3689F-201ENST00000579617 66 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 MIR5192-201ENST00000579892 92 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 AC124944.3-204ENST00000641191 150 ntBASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 TEK-204ENST00000519097 3836 ntTSL 2 BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KRTAP3-3Q9BYR6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 AC022905.1-201ENST00000503430 3048 ntBASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 GABRG2-229ENST00000641017 3628 ntBASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 RNU1-105P-201ENST00000363470 161 ntBASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 RNU4-81P-201ENST00000363561 144 ntBASIC3.45□□□□□ -1.86
KRTAP3-3Q9BYR6 RNA5SP172-201ENST00000365061 118 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms