RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 NISCHQ9Y2I1 1504 aa11.64□□□□□ -0.55
RAB3GAP1-207ENST00000539493 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
RAB3GAP1-207ENST00000539493 MYT1Q01538 1121 aa10.3□□□□□ -0.76
RAB3GAP1-207ENST00000539493 CCDC180Q9P1Z9 1646 aa10.02□□□□□ -0.8
RAB3GAP1-207ENST00000539493 TTBK1Q5TCY1 1321 aaPredicted RBP9.97□□□□□ -0.81
RAB3GAP1-207ENST00000539493 ZCCHC6Q5VYS8 1495 aaKnown RBP9.82□□□□□ -0.84
RAB3GAP1-207ENST00000539493 HRCP23327 699 aa9.7□□□□□ -0.86
RAB3GAP1-207ENST00000539493 SHROOM4Q9ULL8 1493 aa9.68□□□□□ -0.86
RAB3GAP1-207ENST00000539493 DCAF1Q9Y4B6 1507 aa9.6□□□□□ -0.87
RAB3GAP1-207ENST00000539493 DCAF8L2P0C7V8 631 aa9.59□□□□□ -0.87
RAB3GAP1-207ENST00000539493 PRKCSHP14314 528 aaPredicted RBP9.42□□□□□ -0.9
RAB3GAP1-207ENST00000539493 SCAF1Q9H7N4 1312 aaKnown RBP9.42□□□□□ -0.9
RAB3GAP1-207ENST00000539493 MYO15BQ96JP2 1530 aa9.41□□□□□ -0.9
RAB3GAP1-207ENST00000539493 SUPT5HO00267 1087 aaKnown RBP9.39□□□□□ -0.91
RAB3GAP1-207ENST00000539493 APLP2Q06481 763 aa9.39□□□□□ -0.91
RAB3GAP1-207ENST00000539493 ABCC9O60706 1549 aa9.37□□□□□ -0.91
RAB3GAP1-207ENST00000539493 ERICH6Q7L0X2 663 aa9.34□□□□□ -0.91
RAB3GAP1-207ENST00000539493 NACADO15069 1562 aa9.3□□□□□ -0.92
RAB3GAP1-207ENST00000539493 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
RAB3GAP1-207ENST00000539493 BCL11AQ9H165 835 aa9.25□□□□□ -0.93
RAB3GAP1-207ENST00000539493 RB1CC1Q8TDY2 1594 aa9.18□□□□□ -0.94
RAB3GAP1-207ENST00000539493 PPARGC1BQ86YN6 1023 aaKnown RBP9.18□□□□□ -0.94
RAB3GAP1-207ENST00000539493 FAM9AQ8IZU1 332 aaPredicted RBP9.14□□□□□ -0.95
RAB3GAP1-207ENST00000539493 RSF1Q96T23 1441 aaPredicted RBP9.12□□□□□ -0.95
RAB3GAP1-207ENST00000539493 SLC24A1O60721 1099 aa9.11□□□□□ -0.95
RAB3GAP1-207ENST00000539493 CENPBP07199 599 aaPredicted RBP9.08□□□□□ -0.96
RAB3GAP1-207ENST00000539493 CHIC1Q5VXU3 224 aa9.08□□□□□ -0.96
RAB3GAP1-207ENST00000539493 ACIN1Q9UKV3 1341 aaKnown RBP9.06□□□□□ -0.96
RAB3GAP1-207ENST00000539493 CECR2Q9BXF3 1484 aa9.06□□□□□ -0.96
RAB3GAP1-207ENST00000539493 MROH2BQ7Z745 1585 aa9.02□□□□□ -0.97
RAB3GAP1-207ENST00000539493 UNC13AQ9UPW8 1703 aa9.02□□□□□ -0.97
RAB3GAP1-207ENST00000539493 ZEB1P37275 1124 aaPredicted RBP8.99□□□□□ -0.97
RAB3GAP1-207ENST00000539493 BAZ1AQ9NRL2 1556 aaPredicted RBP8.96□□□□□ -0.97
RAB3GAP1-207ENST00000539493 WIZO95785 1651 aa8.95□□□□□ -0.98
RAB3GAP1-207ENST00000539493 PCGF6Q9BYE7 350 aa8.94□□□□□ -0.98
RAB3GAP1-207ENST00000539493 BICRAQ9NZM4 1560 aa8.93□□□□□ -0.98
RAB3GAP1-207ENST00000539493 ANP32EQ9BTT0 268 aa8.91□□□□□ -0.98
RAB3GAP1-207ENST00000539493 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
RAB3GAP1-207ENST00000539493 SMARCA4P51532 1647 aa8.9□□□□□ -0.98
RAB3GAP1-207ENST00000539493 PABPN1Q86U42 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
RAB3GAP1-207ENST00000539493 DAXXQ9UER7 740 aaPredicted RBP8.89□□□□□ -0.99
RAB3GAP1-207ENST00000539493 GTF3C3Q9Y5Q9 886 aa8.88□□□□□ -0.99
RAB3GAP1-207ENST00000539493 TOP2AP11388 1531 aaKnown RBP8.84□□□□□ -0.99
RAB3GAP1-207ENST00000539493 TRIM41Q8WV44 630 aa8.8□□□□□ -1
RAB3GAP1-207ENST00000539493 EIF4G1Q04637 1599 aaKnown RBP8.79□□□□□ -1
RAB3GAP1-207ENST00000539493 PEG3Q9GZU2 1588 aa8.78□□□□□ -1
RAB3GAP1-207ENST00000539493 SMARCA2P51531 1590 aa8.78□□□□□ -1
RAB3GAP1-207ENST00000539493 CCDC88BA6NC98 1476 aa8.77□□□□□ -1.01
RAB3GAP1-207ENST00000539493 LOC105371045A0A1W2PR82 267 aa8.76□□□□□ -1.01
RAB3GAP1-207ENST00000539493 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
RAB3GAP1-207ENST00000539493 CSRNP3Q8WYN3 585 aa8.72□□□□□ -1.01
RAB3GAP1-207ENST00000539493 ATAD2BQ9ULI0 1458 aa8.72□□□□□ -1.01
RAB3GAP1-207ENST00000539493 UBE2Q2Q8WVN8 375 aa8.71□□□□□ -1.02
RAB3GAP1-207ENST00000539493 BAZ1BQ9UIG0 1483 aaKnown RBP8.68□□□□□ -1.02
RAB3GAP1-207ENST00000539493 CLSPNQ9HAW4 1339 aa8.67□□□□□ -1.02
RAB3GAP1-207ENST00000539493 ABCC8Q09428 1581 aa8.67□□□□□ -1.02
RAB3GAP1-207ENST00000539493 EIF5BO60841 1220 aaKnown RBP8.65□□□□□ -1.02
RAB3GAP1-207ENST00000539493 NCAPD3P42695 1498 aa8.6□□□□□ -1.03
RAB3GAP1-207ENST00000539493 HMGXB3Q12766 1538 aa8.6□□□□□ -1.03
RAB3GAP1-207ENST00000539493 WRNQ14191 1432 aaPredicted RBP eCLIP8.57□□□□□ -1.04
RAB3GAP1-207ENST00000539493 EHMT2Q96KQ7 1210 aa8.56□□□□□ -1.04
RAB3GAP1-207ENST00000539493 TSHZ2Q9NRE2 1034 aa8.55□□□□□ -1.04
RAB3GAP1-207ENST00000539493 SOGA1O94964 1423 aa8.55□□□□□ -1.04
RAB3GAP1-207ENST00000539493 ERICH6BQ5W0A0 696 aa8.55□□□□□ -1.04
RAB3GAP1-207ENST00000539493 MYT1LQ9UL68 1186 aa8.54□□□□□ -1.04
RAB3GAP1-207ENST00000539493 SYNJ1O43426 1573 aa8.54□□□□□ -1.04
RAB3GAP1-207ENST00000539493 ANO8Q9HCE9 1232 aaPredicted RBP8.52□□□□□ -1.05
RAB3GAP1-207ENST00000539493 EEA1Q15075 1411 aa8.52□□□□□ -1.05
RAB3GAP1-207ENST00000539493 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
RAB3GAP1-207ENST00000539493 DIEXFQ68CQ4 756 aaKnown RBP8.49□□□□□ -1.05
RAB3GAP1-207ENST00000539493 CFTRP13569 1480 aa8.47□□□□□ -1.05
RAB3GAP1-207ENST00000539493 TOP2BQ02880 1626 aa8.47□□□□□ -1.05
RAB3GAP1-207ENST00000539493 CC2D2AQ9P2K1 1620 aa8.47□□□□□ -1.05
RAB3GAP1-207ENST00000539493 BIVM-ERCC5R4GMW8 1640 aa8.45□□□□□ -1.06
RAB3GAP1-207ENST00000539493 TNIKQ9UKE5 1360 aa8.44□□□□□ -1.06
RAB3GAP1-207ENST00000539493 GOLGA3Q08378 1498 aa8.43□□□□□ -1.06
RAB3GAP1-207ENST00000539493 CEP162Q5TB80 1403 aa8.42□□□□□ -1.06
RAB3GAP1-207ENST00000539493 CUX1P39880 1505 aa8.41□□□□□ -1.06
RAB3GAP1-207ENST00000539493 CEP164Q9UPV0 1460 aa8.41□□□□□ -1.06
RAB3GAP1-207ENST00000539493 KIF21BO75037 1637 aa8.41□□□□□ -1.06
RAB3GAP1-207ENST00000539493 SUPT16HQ9Y5B9 1047 aaKnown RBP8.4□□□□□ -1.06
RAB3GAP1-207ENST00000539493 CADPSQ9ULU8 1353 aa8.4□□□□□ -1.06
RAB3GAP1-207ENST00000539493 PRDM2Q13029 1718 aa8.4□□□□□ -1.06
RAB3GAP1-207ENST00000539493 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
RAB3GAP1-207ENST00000539493 PKNOX2Q96KN3 472 aa8.38□□□□□ -1.07
RAB3GAP1-207ENST00000539493 RAPGEF2Q9Y4G8 1499 aa8.36□□□□□ -1.07
RAB3GAP1-207ENST00000539493 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
RAB3GAP1-207ENST00000539493 PLEKHG5O94827 1062 aa8.35□□□□□ -1.07
RAB3GAP1-207ENST00000539493 PODXL2Q9NZ53 605 aa8.33□□□□□ -1.08
RAB3GAP1-207ENST00000539493 PRXQ9BXM0 1461 aa8.33□□□□□ -1.08
RAB3GAP1-207ENST00000539493 KIF27Q86VH2 1401 aa8.33□□□□□ -1.08
RAB3GAP1-207ENST00000539493 FANCD2Q9BXW9 1451 aa8.32□□□□□ -1.08
RAB3GAP1-207ENST00000539493 ERICH3Q5RHP9 1530 aa8.32□□□□□ -1.08
RAB3GAP1-207ENST00000539493 CLIP1P30622 1438 aa8.31□□□□□ -1.08
RAB3GAP1-207ENST00000539493 FANCIQ9NVI1 1328 aa8.3□□□□□ -1.08
RAB3GAP1-207ENST00000539493 NESP48681 1621 aa8.3□□□□□ -1.08
RAB3GAP1-207ENST00000539493 FGD5Q6ZNL6 1462 aa8.29□□□□□ -1.08
RAB3GAP1-207ENST00000539493 CUX2O14529 1486 aa8.27□□□□□ -1.09
RAB3GAP1-207ENST00000539493 LAMC3Q9Y6N6 1575 aa8.27□□□□□ -1.09
RAB3GAP1-207ENST00000539493 MSH5O43196 834 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms