RNA–Protein interactions for RNA: ENST00000410371.1

RNU6-935P-201, Transcript of RNA, U6 small nuclear 935, pseudogene, humanhuman

BASIC

Gene RNU6-935P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-935P-201ENST00000410371 AEBP2Q6ZN18 517 aaPredicted RBP7.65□□□□□ -1.18
RNU6-935P-201ENST00000410371 CHIC1Q5VXU3 224 aa7.09□□□□□ -1.27
RNU6-935P-201ENST00000410371 SENP3Q9H4L4 574 aaPredicted RBP6.53□□□□□ -1.36
RNU6-935P-201ENST00000410371 PHF23Q9BUL5 403 aaPredicted RBP6.4□□□□□ -1.38
RNU6-935P-201ENST00000410371 POTEDQ86YR6 584 aa6.24□□□□□ -1.41
RNU6-935P-201ENST00000410371 FOXD1Q16676 465 aa6.14□□□□□ -1.43
RNU6-935P-201ENST00000410371 MSH5O43196 834 aa5.84□□□□□ -1.47
RNU6-935P-201ENST00000410371 PIAS4Q8N2W9 510 aaPredicted RBP5.67□□□□□ -1.5
RNU6-935P-201ENST00000410371 PPP6R1Q9UPN7 881 aa5.52□□□□□ -1.53
RNU6-935P-201ENST00000410371 ADRA2BP18089 450 aa5.48□□□□□ -1.53
RNU6-935P-201ENST00000410371 PLPPR3Q6T4P5 718 aa5.39□□□□□ -1.55
RNU6-935P-201ENST00000410371 CACNB1Q02641 598 aaPredicted RBP5.19□□□□□ -1.58
RNU6-935P-201ENST00000410371 DMRT2Q9Y5R5 561 aa5.14□□□□□ -1.59
RNU6-935P-201ENST00000410371 MAPK8IP2Q13387 824 aaPredicted RBP5.12□□□□□ -1.59
RNU6-935P-201ENST00000410371 RNF39Q9H2S5 420 aa4.98□□□□□ -1.61
RNU6-935P-201ENST00000410371 SCAF1Q9H7N4 1312 aaKnown RBP4.95□□□□□ -1.62
RNU6-935P-201ENST00000410371 DCAF8L1A6NGE4 600 aa4.93□□□□□ -1.62
RNU6-935P-201ENST00000410371 C1QBPQ07021 282 aaKnown RBP4.86□□□□□ -1.63
RNU6-935P-201ENST00000410371 HOXD11P31277 338 aaPredicted RBP4.84□□□□□ -1.63
RNU6-935P-201ENST00000410371 POTEHQ6S545 545 aa4.82□□□□□ -1.64
RNU6-935P-201ENST00000410371 RNF216Q9NWF9 866 aaPredicted RBP4.71□□□□□ -1.66
RNU6-935P-201ENST00000410371 PPP4R3CPQ6ZMV5 832 aa4.7□□□□□ -1.66
RNU6-935P-201ENST00000410371 DNAJC5BQ9UF47 199 aa4.7□□□□□ -1.66
RNU6-935P-201ENST00000410371 CNKSR2Q8WXI2 1034 aa4.66□□□□□ -1.66
RNU6-935P-201ENST00000410371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.58□□□□□ -1.68
RNU6-935P-201ENST00000410371 DSG3P32926 999 aa4.56□□□□□ -1.68
RNU6-935P-201ENST00000410371 SPINK5Q9NQ38 1064 aaPredicted RBP4.52□□□□□ -1.69
RNU6-935P-201ENST00000410371 CAPN15O75808 1086 aa4.49□□□□□ -1.69
RNU6-935P-201ENST00000410371 U3KPZ7 1027 aaPredicted RBP4.49□□□□□ -1.69
RNU6-935P-201ENST00000410371 ABCB7O75027 752 aa4.39□□□□□ -1.71
RNU6-935P-201ENST00000410371 NCBP3Q53F19 620 aaKnown RBP4.39□□□□□ -1.71
RNU6-935P-201ENST00000410371 NPM3O75607 178 aaKnown RBP4.38□□□□□ -1.71
RNU6-935P-201ENST00000410371 CHRDL2Q6WN34 429 aa4.38□□□□□ -1.71
RNU6-935P-201ENST00000410371 SP7Q8TDD2 431 aaPredicted RBP4.38□□□□□ -1.71
RNU6-935P-201ENST00000410371 TRHP20396 242 aaPredicted RBP4.35□□□□□ -1.71
RNU6-935P-201ENST00000410371 RBM42Q9BTD8 480 aaKnown RBP4.33□□□□□ -1.72
RNU6-935P-201ENST00000410371 ZNF219Q9P2Y4 722 aaPredicted RBP4.33□□□□□ -1.72
RNU6-935P-201ENST00000410371 SLC4A2P04920 1241 aa4.27□□□□□ -1.73
RNU6-935P-201ENST00000410371 APLP2Q06481 763 aa4.26□□□□□ -1.73
RNU6-935P-201ENST00000410371 PIP4P2Q8N4L2 257 aa4.22□□□□□ -1.73
RNU6-935P-201ENST00000410371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.2□□□□□ -1.74
RNU6-935P-201ENST00000410371 HNRNPUL2Q1KMD3 747 aaKnown RBP4.2□□□□□ -1.74
RNU6-935P-201ENST00000410371 HAX1O00165 279 aa4.18□□□□□ -1.74
RNU6-935P-201ENST00000410371 SAMD1Q6SPF0 538 aaPredicted RBP4.18□□□□□ -1.74
RNU6-935P-201ENST00000410371 AKT1S1Q96B36 256 aa4.17□□□□□ -1.74
RNU6-935P-201ENST00000410371 POLA2Q14181 598 aa4.16□□□□□ -1.74
RNU6-935P-201ENST00000410371 EVX2Q03828 476 aa4.15□□□□□ -1.75
RNU6-935P-201ENST00000410371 REM2Q8IYK8 340 aaPredicted RBP4.14□□□□□ -1.75
RNU6-935P-201ENST00000410371 PITPNM1O00562 1244 aa4.13□□□□□ -1.75
RNU6-935P-201ENST00000410371 FXR2P51116 673 aaKnown RBP eCLIP4.13□□□□□ -1.75
RNU6-935P-201ENST00000410371 OSCARQ8IYS5 282 aa4.09□□□□□ -1.75
RNU6-935P-201ENST00000410371 LHX8Q68G74 356 aa4.08□□□□□ -1.76
RNU6-935P-201ENST00000410371 PLSCR2Q9NRY7 297 aa4.08□□□□□ -1.76
RNU6-935P-201ENST00000410371 MYCNP04198 464 aaPredicted RBP4.04□□□□□ -1.76
RNU6-935P-201ENST00000410371 ZBTB12Q9Y330 459 aaPredicted RBP4.04□□□□□ -1.76
RNU6-935P-201ENST00000410371 KCNA4P22459 653 aa4.03□□□□□ -1.76
RNU6-935P-201ENST00000410371 GABBR2O75899 941 aa4.02□□□□□ -1.77
RNU6-935P-201ENST00000410371 C19orf67A6NJJ6 358 aa4.01□□□□□ -1.77
RNU6-935P-201ENST00000410371 ATF5Q9Y2D1 282 aaPredicted RBP4□□□□□ -1.77
RNU6-935P-201ENST00000410371 PRKAR2AP13861 404 aaKnown RBP3.99□□□□□ -1.77
RNU6-935P-201ENST00000410371 POTEIP0CG38 1075 aa3.96□□□□□ -1.78
RNU6-935P-201ENST00000410371 CLEC11AQ9Y240 323 aa3.91□□□□□ -1.78
RNU6-935P-201ENST00000410371 SPDYE2BA6NHP3 402 aa3.9□□□□□ -1.79
RNU6-935P-201ENST00000410371 SPDYE6P0CI01 402 aa3.9□□□□□ -1.79
RNU6-935P-201ENST00000410371 SPDYE2Q495Y8 402 aa3.9□□□□□ -1.79
RNU6-935P-201ENST00000410371 CHADLQ6NUI6 762 aa3.9□□□□□ -1.79
RNU6-935P-201ENST00000410371 SPDYE1Q8NFV5 336 aaPredicted RBP3.9□□□□□ -1.79
RNU6-935P-201ENST00000410371 POTEMA6NI47 508 aa3.88□□□□□ -1.79
RNU6-935P-201ENST00000410371 POTEGQ6S5H5 508 aa3.86□□□□□ -1.79
RNU6-935P-201ENST00000410371 OTUD5Q96G74 571 aa3.86□□□□□ -1.79
RNU6-935P-201ENST00000410371 CD44P16070 742 aaKnown RBP3.85□□□□□ -1.79
RNU6-935P-201ENST00000410371 SSUH2Q9Y2M2 353 aa3.85□□□□□ -1.79
RNU6-935P-201ENST00000410371 FOXD4L1Q9NU39 408 aa3.84□□□□□ -1.79
RNU6-935P-201ENST00000410371 DCBLD2Q96PD2 775 aa3.83□□□□□ -1.8
RNU6-935P-201ENST00000410371 POTEB2H3BUK9 544 aa3.82□□□□□ -1.8
RNU6-935P-201ENST00000410371 FBLN2P98095 1184 aa3.81□□□□□ -1.8
RNU6-935P-201ENST00000410371 CLCN6P51797 869 aa3.8□□□□□ -1.8
RNU6-935P-201ENST00000410371 MKRN4PQ13434 485 aaPredicted RBP3.8□□□□□ -1.8
RNU6-935P-201ENST00000410371 PRR29P0C7W0 189 aa3.79□□□□□ -1.8
RNU6-935P-201ENST00000410371 ZNF692Q9BU19 519 aaPredicted RBP3.79□□□□□ -1.8
RNU6-935P-201ENST00000410371 FARP1Q9Y4F1 1045 aaPredicted RBP3.79□□□□□ -1.8
RNU6-935P-201ENST00000410371 LCE2DQ5TA82 110 aaPredicted RBP3.78□□□□□ -1.8
RNU6-935P-201ENST00000410371 ZNF579Q8NAF0 562 aaKnown RBP3.78□□□□□ -1.8
RNU6-935P-201ENST00000410371 GALR2O43603 387 aaPredicted RBP3.77□□□□□ -1.81
RNU6-935P-201ENST00000410371 PCDH10Q9P2E7 1040 aa3.77□□□□□ -1.81
RNU6-935P-201ENST00000410371 PABPN1Q86U42 306 aaKnown RBP eCLIP3.75□□□□□ -1.81
RNU6-935P-201ENST00000410371 ZRANB1Q9UGI0 708 aa3.74□□□□□ -1.81
RNU6-935P-201ENST00000410371 ZBTB22O15209 634 aa3.73□□□□□ -1.81
RNU6-935P-201ENST00000410371 POTEJP0CG39 1038 aa3.72□□□□□ -1.81
RNU6-935P-201ENST00000410371 ATXN8OSP0DMR3 200 aa3.72□□□□□ -1.81
RNU6-935P-201ENST00000410371 PELP1Q8IZL8 1130 aaKnown RBP3.72□□□□□ -1.81
RNU6-935P-201ENST00000410371 SLC4A1APQ9BWU0 796 aaKnown RBP3.72□□□□□ -1.81
RNU6-935P-201ENST00000410371 PHF12Q96QT6 1004 aa3.69□□□□□ -1.82
RNU6-935P-201ENST00000410371 METRNQ9UJH8 293 aa3.69□□□□□ -1.82
RNU6-935P-201ENST00000410371 FAM163AQ96GL9 167 aaPredicted RBP3.67□□□□□ -1.82
RNU6-935P-201ENST00000410371 ASTLQ6HA08 431 aaPredicted RBP3.66□□□□□ -1.82
RNU6-935P-201ENST00000410371 CREBZFQ9NS37 354 aa3.66□□□□□ -1.82
RNU6-935P-201ENST00000410371 MAMSTRQ6ZN01 415 aa3.65□□□□□ -1.83
RNU6-935P-201ENST00000410371 ATMINO43313 823 aaPredicted RBP3.64□□□□□ -1.83
RNU6-935P-201ENST00000410371 C7P10643 843 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms