RNA–Protein interactions for RNA: ENST00000560176.1

AC012409.1-201, humanhuman

TSL 3 BASIC

Gene AC012409.1, Length 358 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-201ENST00000560176 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
AC012409.1-201ENST00000560176 CHIC1Q5VXU3 224 aa9.24□□□□□ -0.93
AC012409.1-201ENST00000560176 EHMT2Q96KQ7 1210 aa8.95□□□□□ -0.98
AC012409.1-201ENST00000560176 DAXXQ9UER7 740 aaPredicted RBP8.85□□□□□ -0.99
AC012409.1-201ENST00000560176 NCBP3Q53F19 620 aaKnown RBP8.71□□□□□ -1.02
AC012409.1-201ENST00000560176 PLPPR3Q6T4P5 718 aa8.7□□□□□ -1.02
AC012409.1-201ENST00000560176 RTN4Q9NQC3 1192 aaKnown RBP8.7□□□□□ -1.02
AC012409.1-201ENST00000560176 AMER1Q5JTC6 1135 aaPredicted RBP8.61□□□□□ -1.03
AC012409.1-201ENST00000560176 TTBK1Q5TCY1 1321 aaPredicted RBP8.55□□□□□ -1.04
AC012409.1-201ENST00000560176 MYT1Q01538 1121 aa8.49□□□□□ -1.05
AC012409.1-201ENST00000560176 AEBP2Q6ZN18 517 aaPredicted RBP8.49□□□□□ -1.05
AC012409.1-201ENST00000560176 PELP1Q8IZL8 1130 aaKnown RBP8.41□□□□□ -1.06
AC012409.1-201ENST00000560176 KCNA4P22459 653 aa8.4□□□□□ -1.06
AC012409.1-201ENST00000560176 APLP2Q06481 763 aa8.4□□□□□ -1.06
AC012409.1-201ENST00000560176 ARXQ96QS3 562 aa8.38□□□□□ -1.07
AC012409.1-201ENST00000560176 CSRNP3Q8WYN3 585 aa8.37□□□□□ -1.07
AC012409.1-201ENST00000560176 PRKCSHP14314 528 aaPredicted RBP8.31□□□□□ -1.08
AC012409.1-201ENST00000560176 ERICH6Q7L0X2 663 aa8.31□□□□□ -1.08
AC012409.1-201ENST00000560176 PHF23Q9BUL5 403 aaPredicted RBP8.29□□□□□ -1.08
AC012409.1-201ENST00000560176 TIMELESSQ9UNS1 1208 aa8.19□□□□□ -1.1
AC012409.1-201ENST00000560176 RANGAP1P46060 587 aaPredicted RBP8.13□□□□□ -1.11
AC012409.1-201ENST00000560176 TAOK2Q9UL54 1235 aa8.11□□□□□ -1.11
AC012409.1-201ENST00000560176 HOMEZQ8IX15 550 aa8.1□□□□□ -1.11
AC012409.1-201ENST00000560176 TULP1O00294 542 aaPredicted RBP8.07□□□□□ -1.12
AC012409.1-201ENST00000560176 NISCHQ9Y2I1 1504 aa8.07□□□□□ -1.12
AC012409.1-201ENST00000560176 BCANQ96GW7 911 aa8.05□□□□□ -1.12
AC012409.1-201ENST00000560176 TPRNQ4KMQ1 711 aa7.95□□□□□ -1.14
AC012409.1-201ENST00000560176 SLC4A1APQ9BWU0 796 aaKnown RBP7.95□□□□□ -1.14
AC012409.1-201ENST00000560176 PLCB2Q00722 1185 aa7.87□□□□□ -1.15
AC012409.1-201ENST00000560176 KLHL34Q8N239 644 aa7.87□□□□□ -1.15
AC012409.1-201ENST00000560176 PODXL2Q9NZ53 605 aa7.86□□□□□ -1.15
AC012409.1-201ENST00000560176 GTF3C3Q9Y5Q9 886 aa7.86□□□□□ -1.15
AC012409.1-201ENST00000560176 EIF5BO60841 1220 aaKnown RBP7.84□□□□□ -1.15
AC012409.1-201ENST00000560176 HAP1P54257 671 aaPredicted RBP7.77□□□□□ -1.17
AC012409.1-201ENST00000560176 NPM2Q86SE8 214 aaKnown RBP7.71□□□□□ -1.18
AC012409.1-201ENST00000560176 TMEM132AQ24JP5 1023 aa7.69□□□□□ -1.18
AC012409.1-201ENST00000560176 VSIG10Q8N0Z9 540 aa7.67□□□□□ -1.18
AC012409.1-201ENST00000560176 FBXO3Q9UK99 471 aa7.67□□□□□ -1.18
AC012409.1-201ENST00000560176 C14orf37Q86TY3 774 aa7.63□□□□□ -1.19
AC012409.1-201ENST00000560176 ZBTB22O15209 634 aa7.6□□□□□ -1.19
AC012409.1-201ENST00000560176 TRIM26Q12899 539 aaPredicted RBP7.51□□□□□ -1.21
AC012409.1-201ENST00000560176 PLEKHG5O94827 1062 aa7.48□□□□□ -1.21
AC012409.1-201ENST00000560176 FKBP8Q14318 412 aa7.48□□□□□ -1.21
AC012409.1-201ENST00000560176 KDM2AQ9Y2K7 1162 aa7.48□□□□□ -1.21
AC012409.1-201ENST00000560176 DCAF8L2P0C7V8 631 aa7.47□□□□□ -1.21
AC012409.1-201ENST00000560176 ADRA2BP18089 450 aa7.47□□□□□ -1.21
AC012409.1-201ENST00000560176 SUPT5HO00267 1087 aaKnown RBP7.43□□□□□ -1.22
AC012409.1-201ENST00000560176 HRCP23327 699 aa7.41□□□□□ -1.22
AC012409.1-201ENST00000560176 LOC105371045A0A1W2PR82 267 aa7.39□□□□□ -1.23
AC012409.1-201ENST00000560176 UBTFP17480 764 aaKnown RBP7.39□□□□□ -1.23
AC012409.1-201ENST00000560176 FBLN2P98095 1184 aa7.39□□□□□ -1.23
AC012409.1-201ENST00000560176 NPM3O75607 178 aaKnown RBP7.33□□□□□ -1.24
AC012409.1-201ENST00000560176 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
AC012409.1-201ENST00000560176 SHROOM4Q9ULL8 1493 aa7.25□□□□□ -1.25
AC012409.1-201ENST00000560176 CDK11BP21127 795 aaKnown RBP7.25□□□□□ -1.25
AC012409.1-201ENST00000560176 BCL11AQ9H165 835 aa7.25□□□□□ -1.25
AC012409.1-201ENST00000560176 CDK11AQ9UQ88 783 aaPredicted RBP7.25□□□□□ -1.25
AC012409.1-201ENST00000560176 NBR1Q14596 966 aa7.23□□□□□ -1.25
AC012409.1-201ENST00000560176 CNKSR2Q8WXI2 1034 aa7.23□□□□□ -1.25
AC012409.1-201ENST00000560176 CHMP4AQ9BY43 222 aa7.23□□□□□ -1.25
AC012409.1-201ENST00000560176 HMGB1P09429 215 aaKnown RBP7.22□□□□□ -1.25
AC012409.1-201ENST00000560176 FOXD4L1Q9NU39 408 aa7.21□□□□□ -1.26
AC012409.1-201ENST00000560176 UBE2Q2Q8WVN8 375 aa7.2□□□□□ -1.26
AC012409.1-201ENST00000560176 CCDC9Q9Y3X0 531 aaKnown RBP7.2□□□□□ -1.26
AC012409.1-201ENST00000560176 SAMD1Q6SPF0 538 aaPredicted RBP7.18□□□□□ -1.26
AC012409.1-201ENST00000560176 PPP6R1Q9UPN7 881 aa7.17□□□□□ -1.26
AC012409.1-201ENST00000560176 HSP90B1P14625 803 aaKnown RBP7.16□□□□□ -1.26
AC012409.1-201ENST00000560176 IGSF3O75054 1194 aa7.14□□□□□ -1.27
AC012409.1-201ENST00000560176 PPP4R3CPQ6ZMV5 832 aa7.14□□□□□ -1.27
AC012409.1-201ENST00000560176 PAXIP1Q6ZW49 1069 aaPredicted RBP7.14□□□□□ -1.27
AC012409.1-201ENST00000560176 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.14□□□□□ -1.27
AC012409.1-201ENST00000560176 BRD2P25440 801 aaKnown RBP7.13□□□□□ -1.27
AC012409.1-201ENST00000560176 BBXQ8WY36 941 aaPredicted RBP7.11□□□□□ -1.27
AC012409.1-201ENST00000560176 CFAP44Q96MT7 982 aa7.11□□□□□ -1.27
AC012409.1-201ENST00000560176 TSHZ2Q9NRE2 1034 aa7.09□□□□□ -1.27
AC012409.1-201ENST00000560176 PUS7Q96PZ0 661 aaKnown RBP7.08□□□□□ -1.28
AC012409.1-201ENST00000560176 PDE4CQ08493 712 aa7.07□□□□□ -1.28
AC012409.1-201ENST00000560176 ZBTB7CA1YPR0 619 aa7.06□□□□□ -1.28
AC012409.1-201ENST00000560176 TAF7LQ5H9L4 462 aa7.05□□□□□ -1.28
AC012409.1-201ENST00000560176 DHX37Q8IY37 1157 aaKnown RBP7.05□□□□□ -1.28
AC012409.1-201ENST00000560176 FAM9AQ8IZU1 332 aaPredicted RBP7.03□□□□□ -1.28
AC012409.1-201ENST00000560176 DNAJC5Q9H3Z4 198 aa7.03□□□□□ -1.28
AC012409.1-201ENST00000560176 NEFLP07196 543 aa7.01□□□□□ -1.29
AC012409.1-201ENST00000560176 CCDC180Q9P1Z9 1646 aa7.01□□□□□ -1.29
AC012409.1-201ENST00000560176 NPM1P06748 294 aaKnown RBP eCLIP6.99□□□□□ -1.29
AC012409.1-201ENST00000560176 PKD2Q13563 968 aa6.99□□□□□ -1.29
AC012409.1-201ENST00000560176 NECTIN2Q92692 538 aa6.98□□□□□ -1.29
AC012409.1-201ENST00000560176 ARID3AQ99856 593 aa6.97□□□□□ -1.29
AC012409.1-201ENST00000560176 SPRYD3Q8NCJ5 442 aa6.96□□□□□ -1.3
AC012409.1-201ENST00000560176 BRPF1P55201 1214 aaPredicted RBP6.95□□□□□ -1.3
AC012409.1-201ENST00000560176 RSPH6AQ9H0K4 717 aa6.95□□□□□ -1.3
AC012409.1-201ENST00000560176 SENP3Q9H4L4 574 aaPredicted RBP6.95□□□□□ -1.3
AC012409.1-201ENST00000560176 ZMYND15Q9H091 742 aa6.94□□□□□ -1.3
AC012409.1-201ENST00000560176 TRHP20396 242 aaPredicted RBP6.92□□□□□ -1.3
AC012409.1-201ENST00000560176 POLR3GLQ9BT43 218 aa6.91□□□□□ -1.3
AC012409.1-201ENST00000560176 C1orf115Q9H7X2 142 aa6.89□□□□□ -1.31
AC012409.1-201ENST00000560176 BCCIPQ9P287 314 aaKnown RBP eCLIP6.89□□□□□ -1.31
AC012409.1-201ENST00000560176 KCTD17Q8N5Z5 321 aa6.86□□□□□ -1.31
AC012409.1-201ENST00000560176 PKNOX2Q96KN3 472 aa6.86□□□□□ -1.31
AC012409.1-201ENST00000560176 RAD21O60216 631 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms