RNA–Protein interactions for RNA: ENST00000408637.1

RNU6ATAC42P-201, Transcript of RNA, U6atac small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6ATAC42P, Length 95 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC42P-201ENST00000408637 AEBP2Q6ZN18 517 aaPredicted RBP7.82□□□□□ -1.16
RNU6ATAC42P-201ENST00000408637 CHIC1Q5VXU3 224 aa7.45□□□□□ -1.22
RNU6ATAC42P-201ENST00000408637 SENP3Q9H4L4 574 aaPredicted RBP6.75□□□□□ -1.33
RNU6ATAC42P-201ENST00000408637 PHF23Q9BUL5 403 aaPredicted RBP6.64□□□□□ -1.35
RNU6ATAC42P-201ENST00000408637 FOXD1Q16676 465 aa6.25□□□□□ -1.41
RNU6ATAC42P-201ENST00000408637 PLPPR3Q6T4P5 718 aa5.96□□□□□ -1.46
RNU6ATAC42P-201ENST00000408637 MSH5O43196 834 aa5.91□□□□□ -1.46
RNU6ATAC42P-201ENST00000408637 PIAS4Q8N2W9 510 aaPredicted RBP5.84□□□□□ -1.47
RNU6ATAC42P-201ENST00000408637 PPP6R1Q9UPN7 881 aa5.8□□□□□ -1.48
RNU6ATAC42P-201ENST00000408637 ADRA2BP18089 450 aa5.79□□□□□ -1.48
RNU6ATAC42P-201ENST00000408637 POTEDQ86YR6 584 aa5.77□□□□□ -1.49
RNU6ATAC42P-201ENST00000408637 SCAF1Q9H7N4 1312 aaKnown RBP5.4□□□□□ -1.55
RNU6ATAC42P-201ENST00000408637 DMRT2Q9Y5R5 561 aa5.33□□□□□ -1.56
RNU6ATAC42P-201ENST00000408637 MAPK8IP2Q13387 824 aaPredicted RBP5.32□□□□□ -1.56
RNU6ATAC42P-201ENST00000408637 PPP4R3CPQ6ZMV5 832 aa5.21□□□□□ -1.58
RNU6ATAC42P-201ENST00000408637 CNKSR2Q8WXI2 1034 aa5.14□□□□□ -1.59
RNU6ATAC42P-201ENST00000408637 HOXD11P31277 338 aaPredicted RBP5.13□□□□□ -1.59
RNU6ATAC42P-201ENST00000408637 DCAF8L1A6NGE4 600 aa5.12□□□□□ -1.59
RNU6ATAC42P-201ENST00000408637 CACNB1Q02641 598 aaPredicted RBP5.09□□□□□ -1.59
RNU6ATAC42P-201ENST00000408637 RNF216Q9NWF9 866 aaPredicted RBP5.09□□□□□ -1.59
RNU6ATAC42P-201ENST00000408637 NCBP3Q53F19 620 aaKnown RBP5.06□□□□□ -1.6
RNU6ATAC42P-201ENST00000408637 RNF39Q9H2S5 420 aa5.01□□□□□ -1.61
RNU6ATAC42P-201ENST00000408637 DNAJC5BQ9UF47 199 aa5□□□□□ -1.61
RNU6ATAC42P-201ENST00000408637 C1QBPQ07021 282 aaKnown RBP4.97□□□□□ -1.61
RNU6ATAC42P-201ENST00000408637 NPM3O75607 178 aaKnown RBP4.9□□□□□ -1.63
RNU6ATAC42P-201ENST00000408637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.9□□□□□ -1.63
RNU6ATAC42P-201ENST00000408637 KCNA4P22459 653 aa4.77□□□□□ -1.65
RNU6ATAC42P-201ENST00000408637 U3KPZ7 1027 aaPredicted RBP4.75□□□□□ -1.65
RNU6ATAC42P-201ENST00000408637 APLP2Q06481 763 aa4.72□□□□□ -1.65
RNU6ATAC42P-201ENST00000408637 CAPN15O75808 1086 aa4.71□□□□□ -1.66
RNU6ATAC42P-201ENST00000408637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.69□□□□□ -1.66
RNU6ATAC42P-201ENST00000408637 HNRNPUL2Q1KMD3 747 aaKnown RBP4.69□□□□□ -1.66
RNU6ATAC42P-201ENST00000408637 SLC4A2P04920 1241 aa4.68□□□□□ -1.66
RNU6ATAC42P-201ENST00000408637 DSG3P32926 999 aa4.68□□□□□ -1.66
RNU6ATAC42P-201ENST00000408637 SPINK5Q9NQ38 1064 aaPredicted RBP4.68□□□□□ -1.66
RNU6ATAC42P-201ENST00000408637 ZNF219Q9P2Y4 722 aaPredicted RBP4.65□□□□□ -1.67
RNU6ATAC42P-201ENST00000408637 SAMD1Q6SPF0 538 aaPredicted RBP4.64□□□□□ -1.67
RNU6ATAC42P-201ENST00000408637 TRHP20396 242 aaPredicted RBP4.63□□□□□ -1.67
RNU6ATAC42P-201ENST00000408637 ABCB7O75027 752 aa4.57□□□□□ -1.68
RNU6ATAC42P-201ENST00000408637 MYCNP04198 464 aaPredicted RBP4.57□□□□□ -1.68
RNU6ATAC42P-201ENST00000408637 POTEHQ6S545 545 aa4.53□□□□□ -1.68
RNU6ATAC42P-201ENST00000408637 SLC4A1APQ9BWU0 796 aaKnown RBP4.53□□□□□ -1.68
RNU6ATAC42P-201ENST00000408637 RBM42Q9BTD8 480 aaKnown RBP4.52□□□□□ -1.69
RNU6ATAC42P-201ENST00000408637 POLA2Q14181 598 aa4.5□□□□□ -1.69
RNU6ATAC42P-201ENST00000408637 FOXD4L1Q9NU39 408 aa4.49□□□□□ -1.69
RNU6ATAC42P-201ENST00000408637 ZBTB12Q9Y330 459 aaPredicted RBP4.45□□□□□ -1.7
RNU6ATAC42P-201ENST00000408637 ATXN8OSP0DMR3 200 aa4.41□□□□□ -1.7
RNU6ATAC42P-201ENST00000408637 AKT1S1Q96B36 256 aa4.4□□□□□ -1.71
RNU6ATAC42P-201ENST00000408637 ATF5Q9Y2D1 282 aaPredicted RBP4.4□□□□□ -1.71
RNU6ATAC42P-201ENST00000408637 CHRDL2Q6WN34 429 aa4.39□□□□□ -1.71
RNU6ATAC42P-201ENST00000408637 ZBTB22O15209 634 aa4.35□□□□□ -1.71
RNU6ATAC42P-201ENST00000408637 FBLN2P98095 1184 aa4.33□□□□□ -1.72
RNU6ATAC42P-201ENST00000408637 REM2Q8IYK8 340 aaPredicted RBP4.33□□□□□ -1.72
RNU6ATAC42P-201ENST00000408637 OSCARQ8IYS5 282 aa4.32□□□□□ -1.72
RNU6ATAC42P-201ENST00000408637 SPDYE2BA6NHP3 402 aa4.3□□□□□ -1.72
RNU6ATAC42P-201ENST00000408637 SPDYE6P0CI01 402 aa4.3□□□□□ -1.72
RNU6ATAC42P-201ENST00000408637 SPDYE2Q495Y8 402 aa4.3□□□□□ -1.72
RNU6ATAC42P-201ENST00000408637 PIP4P2Q8N4L2 257 aa4.27□□□□□ -1.73
RNU6ATAC42P-201ENST00000408637 PITPNM1O00562 1244 aa4.26□□□□□ -1.73
RNU6ATAC42P-201ENST00000408637 FXR2P51116 673 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU6ATAC42P-201ENST00000408637 HAX1O00165 279 aa4.23□□□□□ -1.73
RNU6ATAC42P-201ENST00000408637 SPDYE1Q8NFV5 336 aaPredicted RBP4.23□□□□□ -1.73
RNU6ATAC42P-201ENST00000408637 SP7Q8TDD2 431 aaPredicted RBP4.23□□□□□ -1.73
RNU6ATAC42P-201ENST00000408637 ZNF692Q9BU19 519 aaPredicted RBP4.23□□□□□ -1.73
RNU6ATAC42P-201ENST00000408637 MKRN4PQ13434 485 aaPredicted RBP4.2□□□□□ -1.74
RNU6ATAC42P-201ENST00000408637 CLEC11AQ9Y240 323 aa4.2□□□□□ -1.74
RNU6ATAC42P-201ENST00000408637 SSUH2Q9Y2M2 353 aa4.2□□□□□ -1.74
RNU6ATAC42P-201ENST00000408637 PRKAR2AP13861 404 aaKnown RBP4.17□□□□□ -1.74
RNU6ATAC42P-201ENST00000408637 CSRNP3Q8WYN3 585 aa4.16□□□□□ -1.74
RNU6ATAC42P-201ENST00000408637 PRR29P0C7W0 189 aa4.15□□□□□ -1.75
RNU6ATAC42P-201ENST00000408637 PABPN1Q86U42 306 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNU6ATAC42P-201ENST00000408637 C19orf67A6NJJ6 358 aa4.11□□□□□ -1.75
RNU6ATAC42P-201ENST00000408637 EVX2Q03828 476 aa4.11□□□□□ -1.75
RNU6ATAC42P-201ENST00000408637 STAG3Q9UJ98 1225 aa4.09□□□□□ -1.75
RNU6ATAC42P-201ENST00000408637 CLCN6P51797 869 aa4.08□□□□□ -1.76
RNU6ATAC42P-201ENST00000408637 CHADLQ6NUI6 762 aa4.08□□□□□ -1.76
RNU6ATAC42P-201ENST00000408637 EHMT2Q96KQ7 1210 aa4.07□□□□□ -1.76
RNU6ATAC42P-201ENST00000408637 GABBR2O75899 941 aa4.06□□□□□ -1.76
RNU6ATAC42P-201ENST00000408637 FARP1Q9Y4F1 1045 aaPredicted RBP4.06□□□□□ -1.76
RNU6ATAC42P-201ENST00000408637 SPDYE4A6NLX3 237 aa4.04□□□□□ -1.76
RNU6ATAC42P-201ENST00000408637 CD44P16070 742 aaKnown RBP4.03□□□□□ -1.76
RNU6ATAC42P-201ENST00000408637 PAK3O75914 559 aaPredicted RBP3.99□□□□□ -1.77
RNU6ATAC42P-201ENST00000408637 NPM1P06748 294 aaKnown RBP eCLIP3.99□□□□□ -1.77
RNU6ATAC42P-201ENST00000408637 LHX8Q68G74 356 aa3.99□□□□□ -1.77
RNU6ATAC42P-201ENST00000408637 CREBZFQ9NS37 354 aa3.99□□□□□ -1.77
RNU6ATAC42P-201ENST00000408637 DCBLD2Q96PD2 775 aa3.98□□□□□ -1.77
RNU6ATAC42P-201ENST00000408637 ZRANB1Q9UGI0 708 aa3.98□□□□□ -1.77
RNU6ATAC42P-201ENST00000408637 ZNF579Q8NAF0 562 aaKnown RBP3.97□□□□□ -1.77
RNU6ATAC42P-201ENST00000408637 PLEKHG5O94827 1062 aa3.93□□□□□ -1.78
RNU6ATAC42P-201ENST00000408637 POTEIP0CG38 1075 aa3.93□□□□□ -1.78
RNU6ATAC42P-201ENST00000408637 PROM2Q8N271 834 aa3.92□□□□□ -1.78
RNU6ATAC42P-201ENST00000408637 MNX1P50219 401 aaPredicted RBP3.91□□□□□ -1.78
RNU6ATAC42P-201ENST00000408637 GALR2O43603 387 aaPredicted RBP3.9□□□□□ -1.79
RNU6ATAC42P-201ENST00000408637 PHF12Q96QT6 1004 aa3.89□□□□□ -1.79
RNU6ATAC42P-201ENST00000408637 MIER1Q8N108 512 aa3.88□□□□□ -1.79
RNU6ATAC42P-201ENST00000408637 TSPYL2Q9H2G4 693 aaPredicted RBP3.86□□□□□ -1.79
RNU6ATAC42P-201ENST00000408637 C7P10643 843 aa3.85□□□□□ -1.79
RNU6ATAC42P-201ENST00000408637 ZBTB47Q9UFB7 747 aaPredicted RBP3.85□□□□□ -1.79
RNU6ATAC42P-201ENST00000408637 ASTLQ6HA08 431 aaPredicted RBP3.84□□□□□ -1.79
RNU6ATAC42P-201ENST00000408637 PLCD3Q8N3E9 789 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms