RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 NISCHQ9Y2I1 1504 aa13.8□□□□□ -0.2
TSC1-203ENST00000440111 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
TSC1-203ENST00000440111 MYT1Q01538 1121 aa12.06□□□□□ -0.48
TSC1-203ENST00000440111 FAM9AQ8IZU1 332 aaPredicted RBP11.94□□□□□ -0.5
TSC1-203ENST00000440111 CCER1Q8TC90 406 aaPredicted RBP11.89□□□□□ -0.51
TSC1-203ENST00000440111 CCDC180Q9P1Z9 1646 aa11.82□□□□□ -0.52
TSC1-203ENST00000440111 ERICH6Q7L0X2 663 aa11.7□□□□□ -0.54
TSC1-203ENST00000440111 DCAF8L2P0C7V8 631 aa11.69□□□□□ -0.54
TSC1-203ENST00000440111 ZCCHC6Q5VYS8 1495 aaKnown RBP11.67□□□□□ -0.54
TSC1-203ENST00000440111 YTHDC1Q96MU7 727 aaKnown RBP11.67□□□□□ -0.54
TSC1-203ENST00000440111 SUPT5HO00267 1087 aaKnown RBP11.62□□□□□ -0.55
TSC1-203ENST00000440111 DCAF1Q9Y4B6 1507 aa11.61□□□□□ -0.55
TSC1-203ENST00000440111 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
TSC1-203ENST00000440111 SHROOM4Q9ULL8 1493 aa11.52□□□□□ -0.56
TSC1-203ENST00000440111 APLP2Q06481 763 aa11.49□□□□□ -0.57
TSC1-203ENST00000440111 ZEB1P37275 1124 aaPredicted RBP11.42□□□□□ -0.58
TSC1-203ENST00000440111 MYO15BQ96JP2 1530 aa11.39□□□□□ -0.59
TSC1-203ENST00000440111 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
TSC1-203ENST00000440111 CHIC1Q5VXU3 224 aa11.23□□□□□ -0.61
TSC1-203ENST00000440111 NEFLP07196 543 aa11.19□□□□□ -0.62
TSC1-203ENST00000440111 CENPBP07199 599 aaPredicted RBP11.17□□□□□ -0.62
TSC1-203ENST00000440111 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
TSC1-203ENST00000440111 NACADO15069 1562 aa11.12□□□□□ -0.63
TSC1-203ENST00000440111 HRCP23327 699 aa11.08□□□□□ -0.64
TSC1-203ENST00000440111 TRIM26Q12899 539 aaPredicted RBP11.08□□□□□ -0.64
TSC1-203ENST00000440111 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
TSC1-203ENST00000440111 ABCC9O60706 1549 aa10.97□□□□□ -0.65
TSC1-203ENST00000440111 EEA1Q15075 1411 aa10.95□□□□□ -0.66
TSC1-203ENST00000440111 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
TSC1-203ENST00000440111 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
TSC1-203ENST00000440111 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
TSC1-203ENST00000440111 RANGAP1P46060 587 aaPredicted RBP10.87□□□□□ -0.67
TSC1-203ENST00000440111 BAZ1AQ9NRL2 1556 aaPredicted RBP10.83□□□□□ -0.68
TSC1-203ENST00000440111 ZNF316A6NFI3 1004 aaPredicted RBP10.83□□□□□ -0.68
TSC1-203ENST00000440111 CLSPNQ9HAW4 1339 aa10.81□□□□□ -0.68
TSC1-203ENST00000440111 RTL5Q5HYW3 569 aaPredicted RBP10.79□□□□□ -0.68
TSC1-203ENST00000440111 SCRIBQ14160 1630 aa10.77□□□□□ -0.68
TSC1-203ENST00000440111 NEFMP07197 916 aa10.77□□□□□ -0.69
TSC1-203ENST00000440111 GLIPR1L2Q4G1C9 344 aa10.76□□□□□ -0.69
TSC1-203ENST00000440111 ZBTB47Q9UFB7 747 aaPredicted RBP10.72□□□□□ -0.69
TSC1-203ENST00000440111 EIF5BO60841 1220 aaKnown RBP10.71□□□□□ -0.69
TSC1-203ENST00000440111 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
TSC1-203ENST00000440111 MYT1LQ9UL68 1186 aa10.65□□□□□ -0.7
TSC1-203ENST00000440111 ATP1B4Q9UN42 357 aaPredicted RBP10.64□□□□□ -0.71
TSC1-203ENST00000440111 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
TSC1-203ENST00000440111 ACIN1Q9UKV3 1341 aaKnown RBP10.61□□□□□ -0.71
TSC1-203ENST00000440111 TNIKQ9UKE5 1360 aa10.6□□□□□ -0.71
TSC1-203ENST00000440111 TOP2AP11388 1531 aaKnown RBP10.59□□□□□ -0.71
TSC1-203ENST00000440111 GOLGA3Q08378 1498 aa10.58□□□□□ -0.72
TSC1-203ENST00000440111 CDK11BP21127 795 aaKnown RBP10.57□□□□□ -0.72
TSC1-203ENST00000440111 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
TSC1-203ENST00000440111 LOC105371045A0A1W2PR82 267 aa10.55□□□□□ -0.72
TSC1-203ENST00000440111 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
TSC1-203ENST00000440111 ANP32BQ92688 251 aaKnown RBP10.54□□□□□ -0.72
TSC1-203ENST00000440111 WRNQ14191 1432 aaPredicted RBP eCLIP10.53□□□□□ -0.72
TSC1-203ENST00000440111 SMARCA2P51531 1590 aa10.53□□□□□ -0.72
TSC1-203ENST00000440111 SLC4A1APQ9BWU0 796 aaKnown RBP10.49□□□□□ -0.73
TSC1-203ENST00000440111 MROH2BQ7Z745 1585 aa10.46□□□□□ -0.73
TSC1-203ENST00000440111 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
TSC1-203ENST00000440111 CECR2Q9BXF3 1484 aa10.43□□□□□ -0.74
TSC1-203ENST00000440111 CEP162Q5TB80 1403 aa10.43□□□□□ -0.74
TSC1-203ENST00000440111 CLIP1P30622 1438 aa10.41□□□□□ -0.74
TSC1-203ENST00000440111 SMARCA4P51532 1647 aa10.41□□□□□ -0.74
TSC1-203ENST00000440111 KIF27Q86VH2 1401 aa10.37□□□□□ -0.75
TSC1-203ENST00000440111 CCDC88BA6NC98 1476 aa10.35□□□□□ -0.75
TSC1-203ENST00000440111 POLR3GLQ9BT43 218 aa10.34□□□□□ -0.75
TSC1-203ENST00000440111 DIEXFQ68CQ4 756 aaKnown RBP10.34□□□□□ -0.75
TSC1-203ENST00000440111 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
TSC1-203ENST00000440111 TIMELESSQ9UNS1 1208 aa10.33□□□□□ -0.76
TSC1-203ENST00000440111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
TSC1-203ENST00000440111 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
TSC1-203ENST00000440111 PEG3Q9GZU2 1588 aa10.29□□□□□ -0.76
TSC1-203ENST00000440111 FHAD1B1AJZ9 1412 aa10.27□□□□□ -0.76
TSC1-203ENST00000440111 SLC24A1O60721 1099 aa10.27□□□□□ -0.77
TSC1-203ENST00000440111 ATAD2BQ9ULI0 1458 aa10.26□□□□□ -0.77
TSC1-203ENST00000440111 CANXP27824 592 aaKnown RBP10.25□□□□□ -0.77
TSC1-203ENST00000440111 HMGXB3Q12766 1538 aa10.24□□□□□ -0.77
TSC1-203ENST00000440111 PABPN1Q86U42 306 aaKnown RBP eCLIP10.24□□□□□ -0.77
TSC1-203ENST00000440111 NCAPD3P42695 1498 aa10.24□□□□□ -0.77
TSC1-203ENST00000440111 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
TSC1-203ENST00000440111 KIF21BO75037 1637 aa10.23□□□□□ -0.77
TSC1-203ENST00000440111 HSP90AA1P07900 732 aaKnown RBP10.22□□□□□ -0.77
TSC1-203ENST00000440111 TNNT2P45379 298 aaPredicted RBP10.21□□□□□ -0.78
TSC1-203ENST00000440111 UPF2Q9HAU5 1272 aaKnown RBP10.2□□□□□ -0.78
TSC1-203ENST00000440111 WIZO95785 1651 aa10.2□□□□□ -0.78
TSC1-203ENST00000440111 PPARGC1BQ86YN6 1023 aaKnown RBP10.2□□□□□ -0.78
TSC1-203ENST00000440111 ABCC8Q09428 1581 aa10.19□□□□□ -0.78
TSC1-203ENST00000440111 SOGA1O94964 1423 aa10.14□□□□□ -0.79
TSC1-203ENST00000440111 ANP32AP39687 249 aaKnown RBP10.13□□□□□ -0.79
TSC1-203ENST00000440111 NPM2Q86SE8 214 aaKnown RBP10.1□□□□□ -0.79
TSC1-203ENST00000440111 FMN1Q68DA7 1419 aa10.1□□□□□ -0.79
TSC1-203ENST00000440111 BCANQ96GW7 911 aa10.1□□□□□ -0.79
TSC1-203ENST00000440111 CADPSQ9ULU8 1353 aa10.1□□□□□ -0.79
TSC1-203ENST00000440111 CNGB1Q14028 1251 aaPredicted RBP10.09□□□□□ -0.79
TSC1-203ENST00000440111 TRIM44Q96DX7 344 aaPredicted RBP10.09□□□□□ -0.79
TSC1-203ENST00000440111 ESF1Q9H501 851 aaKnown RBP10.08□□□□□ -0.8
TSC1-203ENST00000440111 CCNB3Q8WWL7 1395 aa10.08□□□□□ -0.8
TSC1-203ENST00000440111 RAPGEF2Q9Y4G8 1499 aa10.08□□□□□ -0.8
TSC1-203ENST00000440111 EIF4G1Q04637 1599 aaKnown RBP10.08□□□□□ -0.8
TSC1-203ENST00000440111 AMER1Q5JTC6 1135 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms