Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL121906.2-201ENST00000621597 723 ntBASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LIN7CQ9NUP9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 AC006058.3-201ENST00000606217 1069 ntBASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.79■□□□□ 0.12
LIN7CQ9NUP9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 AL031598.1-201ENST00000561511 1773 ntBASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 AL121829.2-201ENST00000620908 328 ntBASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 FP475955.4-201ENST00000623131 1990 ntBASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIN7CQ9NUP9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms