Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 AC009113.1-201ENST00000570267 2443 ntBASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 TSPY23P-201ENST00000440136 739 ntBASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 AC026366.1-201ENST00000488803 879 ntBASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.27■□□□□ 0.52
LRTM1Q9HBL6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
LRTM1Q9HBL6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRTM1Q9HBL6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRTM1Q9HBL6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRTM1Q9HBL6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRTM1Q9HBL6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 AC233263.1-201ENST00000578059 224 ntBASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.26■□□□□ 0.51
LRTM1Q9HBL6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 AC090164.3-201ENST00000610780 2143 ntBASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms