Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 AC092647.4-201ENST00000457211 535 ntBASIC19.69■□□□□ 0.74
RNF38Q9H0F5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF38Q9H0F5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 KRT18P38-201ENST00000449496 1282 ntBASIC19.68■□□□□ 0.74
RNF38Q9H0F5 AL359075.1-203ENST00000462729 1002 ntBASIC19.68■□□□□ 0.74
RNF38Q9H0F5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF38Q9H0F5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 AL023284.2-201ENST00000405850 579 ntBASIC19.67■□□□□ 0.74
RNF38Q9H0F5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 GCSHP2-201ENST00000560971 527 ntBASIC19.67■□□□□ 0.74
RNF38Q9H0F5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 NEK4P2-201ENST00000580004 1012 ntBASIC19.67■□□□□ 0.74
RNF38Q9H0F5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 KRT8P3-201ENST00000519669 1449 ntBASIC19.67■□□□□ 0.74
RNF38Q9H0F5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF38Q9H0F5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms