Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 AC124283.5-201ENST00000624661 1809 ntBASIC17.93■□□□□ 0.46
TUBA1CQ9BQE3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TUBA1CQ9BQE3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 WIZP1-201ENST00000531444 2299 ntBASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 AC239809.2-201ENST00000415381 517 ntBASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 RPS2P4-201ENST00000476944 856 ntBASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 AC008550.1-201ENST00000511500 884 ntBASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 AL031963.3-201ENST00000606441 850 ntBASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 AC124016.1-201ENST00000609552 612 ntBASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBA1CQ9BQE3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 KRT8P20-201ENST00000423953 1409 ntBASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 KRASP1-201ENST00000407852 552 ntBASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA1CQ9BQE3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA1CQ9BQE3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms