Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 HTR7P1-201ENST00000538670 1336 ntBASIC20.09■□□□□ 0.81
TRIM11Q96F44 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 AC004980.1-204ENST00000429707 299 ntBASIC20.09■□□□□ 0.81
TRIM11Q96F44 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 PRSS44-201ENST00000515154 1146 ntBASIC20.09■□□□□ 0.81
TRIM11Q96F44 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
TRIM11Q96F44 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM11Q96F44 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM11Q96F44 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM11Q96F44 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
TRIM11Q96F44 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM11Q96F44 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM11Q96F44 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM11Q96F44 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM11Q96F44 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM11Q96F44 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TRIM11Q96F44 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM11Q96F44 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM11Q96F44 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM11Q96F44 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM11Q96F44 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM11Q96F44 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM11Q96F44 C1QBPP2-201ENST00000528754 825 ntBASIC20.08■□□□□ 0.81
TRIM11Q96F44 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM11Q96F44 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM11Q96F44 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.08■□□□□ 0.8
TRIM11Q96F44 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
TRIM11Q96F44 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIM11Q96F44 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM11Q96F44 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.08■□□□□ 0.8
TRIM11Q96F44 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM11Q96F44 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM11Q96F44 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms