Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 AF201337.1-201ENST00000520239 748 ntBASIC18.08■□□□□ 0.48
LRRC58Q96CX6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 AC138932.1-201ENST00000534164 6830 ntBASIC18.07■□□□□ 0.48
LRRC58Q96CX6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 TUBB8P6-201ENST00000436895 1288 ntBASIC18.07■□□□□ 0.48
LRRC58Q96CX6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 LTB4R2-202ENST00000528054 3092 ntBASIC18.07■□□□□ 0.48
LRRC58Q96CX6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 AC126763.1-201ENST00000552015 2118 ntBASIC18.07■□□□□ 0.48
LRRC58Q96CX6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC58Q96CX6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 AP000997.3-201ENST00000623333 2250 ntBASIC18.06■□□□□ 0.48
LRRC58Q96CX6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRRC58Q96CX6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC58Q96CX6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms