Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.31■□□□□ 0.36
HPS1Q92902 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS1Q92902 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS1Q92902 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.31■□□□□ 0.36
HPS1Q92902 AC008687.6-201ENST00000596318 630 ntBASIC17.31■□□□□ 0.36
HPS1Q92902 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS1Q92902 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.31■□□□□ 0.36
HPS1Q92902 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS1Q92902 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.31■□□□□ 0.36
HPS1Q92902 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS1Q92902 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS1Q92902 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.31■□□□□ 0.36
HPS1Q92902 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HPS1Q92902 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS1Q92902 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HPS1Q92902 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS1Q92902 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HPS1Q92902 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS1Q92902 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS1Q92902 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS1Q92902 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS1Q92902 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS1Q92902 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS1Q92902 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS1Q92902 MCRIP2P1-201ENST00000394346 511 ntBASIC17.3■□□□□ 0.36
HPS1Q92902 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS1Q92902 ESRRAP1-201ENST00000400596 1257 ntBASIC17.3■□□□□ 0.36
HPS1Q92902 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HPS1Q92902 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS1Q92902 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS1Q92902 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
HPS1Q92902 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS1Q92902 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS1Q92902 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HPS1Q92902 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS1Q92902 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS1Q92902 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS1Q92902 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HPS1Q92902 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS1Q92902 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS1Q92902 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HPS1Q92902 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS1Q92902 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HPS1Q92902 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HPS1Q92902 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HPS1Q92902 AC141586.5-201ENST00000624546 2050 ntBASIC17.29■□□□□ 0.36
HPS1Q92902 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HPS1Q92902 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HPS1Q92902 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.29■□□□□ 0.36
HPS1Q92902 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.29■□□□□ 0.36
HPS1Q92902 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.29■□□□□ 0.36
HPS1Q92902 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.29■□□□□ 0.36
HPS1Q92902 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.29■□□□□ 0.36
HPS1Q92902 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HPS1Q92902 BICD1-207ENST00000551848 1962 ntBASIC17.29■□□□□ 0.36
HPS1Q92902 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.29■□□□□ 0.36
HPS1Q92902 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.29■□□□□ 0.36
HPS1Q92902 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS1Q92902 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HPS1Q92902 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.29■□□□□ 0.36
HPS1Q92902 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.28■□□□□ 0.36
HPS1Q92902 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS1Q92902 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS1Q92902 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS1Q92902 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS1Q92902 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS1Q92902 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS1Q92902 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS1Q92902 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.28■□□□□ 0.36
HPS1Q92902 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS1Q92902 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms