Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT9Q92600 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNOT9Q92600 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.51■□□□□ 0.39
CNOT9Q92600 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNOT9Q92600 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT9Q92600 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CNOT9Q92600 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT9Q92600 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.51■□□□□ 0.39
CNOT9Q92600 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT9Q92600 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT9Q92600 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT9Q92600 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT9Q92600 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNOT9Q92600 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT9Q92600 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CNOT9Q92600 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT9Q92600 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CNOT9Q92600 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT9Q92600 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT9Q92600 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT9Q92600 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 AC004980.1-204ENST00000429707 299 ntBASIC17.5■□□□□ 0.39
CNOT9Q92600 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.5■□□□□ 0.39
CNOT9Q92600 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT9Q92600 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.5■□□□□ 0.39
CNOT9Q92600 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT9Q92600 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.5■□□□□ 0.39
CNOT9Q92600 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT9Q92600 AL353708.3-201ENST00000610272 989 ntBASIC17.5■□□□□ 0.39
CNOT9Q92600 FAM197Y4-202ENST00000622692 608 ntBASIC17.5■□□□□ 0.39
CNOT9Q92600 AC131212.4-201ENST00000623606 975 ntBASIC17.5■□□□□ 0.39
CNOT9Q92600 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT9Q92600 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
CNOT9Q92600 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT9Q92600 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT9Q92600 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT9Q92600 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNOT9Q92600 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CNOT9Q92600 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT9Q92600 KSR1P1-201ENST00000446298 240 ntBASIC17.49■□□□□ 0.39
CNOT9Q92600 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.49■□□□□ 0.39
CNOT9Q92600 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CNOT9Q92600 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.49■□□□□ 0.39
CNOT9Q92600 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT9Q92600 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CNOT9Q92600 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT9Q92600 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT9Q92600 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.49■□□□□ 0.39
CNOT9Q92600 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT9Q92600 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT9Q92600 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CNOT9Q92600 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT9Q92600 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.48■□□□□ 0.39
CNOT9Q92600 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CNOT9Q92600 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT9Q92600 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CNOT9Q92600 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT9Q92600 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CNOT9Q92600 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT9Q92600 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT9Q92600 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT9Q92600 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT9Q92600 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms