Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.41■■□□□ 1.34
RTL9Q8NET4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.41■■□□□ 1.34
RTL9Q8NET4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.41■■□□□ 1.34
RTL9Q8NET4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.41■■□□□ 1.34
RTL9Q8NET4 CLEC4GP1-201ENST00000596555 870 ntBASIC23.41■■□□□ 1.34
RTL9Q8NET4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.41■■□□□ 1.34
RTL9Q8NET4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.41■■□□□ 1.34
RTL9Q8NET4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.41■■□□□ 1.34
RTL9Q8NET4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.41■■□□□ 1.34
RTL9Q8NET4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTL9Q8NET4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.41■■□□□ 1.34
RTL9Q8NET4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 AL450487.1-201ENST00000426799 995 ntBASIC23.4■■□□□ 1.34
RTL9Q8NET4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 VENTXP5-201ENST00000523979 775 ntBASIC23.4■■□□□ 1.34
RTL9Q8NET4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 HBZP1-201ENST00000354915 429 ntBASIC23.4■■□□□ 1.34
RTL9Q8NET4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RTL9Q8NET4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 RASA4DP-201ENST00000460726 1199 ntBASIC23.4■■□□□ 1.34
RTL9Q8NET4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.4■■□□□ 1.34
RTL9Q8NET4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.4■■□□□ 1.34
RTL9Q8NET4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.39■■□□□ 1.34
RTL9Q8NET4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RTL9Q8NET4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
RTL9Q8NET4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RTL9Q8NET4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RTL9Q8NET4 LINC01311-201ENST00000565162 1445 ntBASIC23.39■■□□□ 1.33
RTL9Q8NET4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.39■■□□□ 1.33
RTL9Q8NET4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
RTL9Q8NET4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTL9Q8NET4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTL9Q8NET4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTL9Q8NET4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RTL9Q8NET4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
RTL9Q8NET4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.39■■□□□ 1.33
RTL9Q8NET4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
RTL9Q8NET4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTL9Q8NET4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
RTL9Q8NET4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTL9Q8NET4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC23.39■■□□□ 1.33
RTL9Q8NET4 SEC1P-202ENST00000473944 940 ntBASIC23.39■■□□□ 1.33
RTL9Q8NET4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.39■■□□□ 1.33
RTL9Q8NET4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.39■■□□□ 1.33
RTL9Q8NET4 AC069148.1-201ENST00000608741 768 ntBASIC23.39■■□□□ 1.33
RTL9Q8NET4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.38■■□□□ 1.33
RTL9Q8NET4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.38■■□□□ 1.33
RTL9Q8NET4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.38■■□□□ 1.33
RTL9Q8NET4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.38■■□□□ 1.33
RTL9Q8NET4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL9Q8NET4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms