Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SETD9Q8NE22 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.45■□□□□ 0.38
SETD9Q8NE22 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
SETD9Q8NE22 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SETD9Q8NE22 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SETD9Q8NE22 AC008406.3-201ENST00000620001 1374 ntBASIC17.43■□□□□ 0.38
SETD9Q8NE22 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 C2orf69P4-201ENST00000565394 541 ntBASIC17.43■□□□□ 0.38
SETD9Q8NE22 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SETD9Q8NE22 AC110285.6-201ENST00000617652 491 ntBASIC17.43■□□□□ 0.38
SETD9Q8NE22 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.43■□□□□ 0.38
SETD9Q8NE22 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.43■□□□□ 0.38
SETD9Q8NE22 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 ESPNP-201ENST00000270691 2015 ntBASIC17.43■□□□□ 0.38
SETD9Q8NE22 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SETD9Q8NE22 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SETD9Q8NE22 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SETD9Q8NE22 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SETD9Q8NE22 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SETD9Q8NE22 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SETD9Q8NE22 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SETD9Q8NE22 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SETD9Q8NE22 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
SETD9Q8NE22 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SETD9Q8NE22 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.42■□□□□ 0.38
SETD9Q8NE22 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SETD9Q8NE22 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SETD9Q8NE22 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SETD9Q8NE22 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SETD9Q8NE22 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SETD9Q8NE22 GNAS-203ENST00000306120 1878 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms