Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
LYSMD2Q8IV50 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
LYSMD2Q8IV50 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LYSMD2Q8IV50 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.26
LYSMD2Q8IV50 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 KRT18P20-201ENST00000548986 1279 ntBASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 MIR6084-201ENST00000622012 110 ntBASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD2Q8IV50 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 AL356652.1-201ENST00000615962 565 ntBASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 PTBP1P-201ENST00000554374 1601 ntBASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 AL391005.1-201ENST00000623953 2435 ntBASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 KRT8P17-201ENST00000453110 1448 ntBASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.69■□□□□ 0.26
LYSMD2Q8IV50 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 AIRN-201ENST00000601203 4374 ntBASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD2Q8IV50 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms