Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 CR769767.2-201ENST00000622735 460 ntBASIC21.2■□□□□ 0.98
TRIM50Q86XT4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 GPAT2P1-201ENST00000444924 1672 ntBASIC21.2■□□□□ 0.98
TRIM50Q86XT4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 HOMER2P1-201ENST00000455653 964 ntBASIC21.19■□□□□ 0.98
TRIM50Q86XT4 GCSHP2-201ENST00000560971 527 ntBASIC21.19■□□□□ 0.98
TRIM50Q86XT4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 Z82202.1-201ENST00000623446 1880 ntBASIC21.19■□□□□ 0.98
TRIM50Q86XT4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM50Q86XT4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 UPK3BP1-201ENST00000428678 509 ntBASIC21.18■□□□□ 0.98
TRIM50Q86XT4 AL671277.2-201ENST00000458060 996 ntBASIC21.18■□□□□ 0.98
TRIM50Q86XT4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 AL158211.5-201ENST00000623583 2518 ntBASIC21.18■□□□□ 0.98
TRIM50Q86XT4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM50Q86XT4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.17■□□□□ 0.98
TRIM50Q86XT4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM50Q86XT4 AIRN-201ENST00000601203 4374 ntBASIC21.17■□□□□ 0.98
TRIM50Q86XT4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms