Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 AC091874.3-201ENST00000512672 1195 ntBASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 AC092118.2-201ENST00000613495 667 ntBASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 AC006557.6-201ENST00000623071 864 ntBASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 AL354751.1-201ENST00000412768 1863 ntBASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.49■□□□□ 0.39
PTCHD4Q6ZW05 PCDHB18P-201ENST00000524813 2368 ntBASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCHD4Q6ZW05 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.47■□□□□ 0.39
PTCHD4Q6ZW05 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 NOC2LP1-202ENST00000452600 2235 ntBASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 NCF1B-203ENST00000435988 1254 ntBASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 TSPY6P-201ENST00000448518 926 ntBASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 PKD1P1-201ENST00000458669 6805 ntBASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.46■□□□□ 0.39
PTCHD4Q6ZW05 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTCHD4Q6ZW05 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
PTCHD4Q6ZW05 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCHD4Q6ZW05 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms