Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.46■■□□□ 1.03
SHC4Q6S5L8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHC4Q6S5L8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SHC4Q6S5L8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHC4Q6S5L8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SHC4Q6S5L8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SHC4Q6S5L8 AC007613.1-201ENST00000572811 2597 ntBASIC21.45■■□□□ 1.03
SHC4Q6S5L8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.45■■□□□ 1.03
SHC4Q6S5L8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SHC4Q6S5L8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.45■■□□□ 1.02
SHC4Q6S5L8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.45■■□□□ 1.02
SHC4Q6S5L8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 HTR7P1-201ENST00000538670 1336 ntBASIC21.45■■□□□ 1.02
SHC4Q6S5L8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHC4Q6S5L8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC4Q6S5L8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 C1QBPP2-201ENST00000528754 825 ntBASIC21.43■■□□□ 1.02
SHC4Q6S5L8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 AL353708.3-201ENST00000610272 989 ntBASIC21.43■■□□□ 1.02
SHC4Q6S5L8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 RCC2P6-201ENST00000526625 1557 ntBASIC21.43■■□□□ 1.02
SHC4Q6S5L8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SHC4Q6S5L8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.42■■□□□ 1.02
SHC4Q6S5L8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 AC131212.4-201ENST00000623606 975 ntBASIC21.42■■□□□ 1.02
SHC4Q6S5L8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC4Q6S5L8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms