Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 MIR2861-201ENST00000636310 90 ntBASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 AC008894.3-201ENST00000624324 3103 ntBASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 AC007322.3-201ENST00000426526 701 ntBASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 AC233263.1-201ENST00000578059 224 ntBASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXR1Q6PIV2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXR1Q6PIV2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
FOXR1Q6PIV2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms