Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 KRT8P45-201ENST00000414328 1447 ntBASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 TSPY5P-201ENST00000426936 936 ntBASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 AC139887.4-201ENST00000607877 719 ntBASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
ARFGEF3Q5TH69 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 BX664615.1-201ENST00000443558 458 ntBASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 TREX1-205ENST00000625293 1783 ntBASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.13■□□□□ 0.17
ARFGEF3Q5TH69 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 TEX21P-204ENST00000641479 1693 ntBASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ARFGEF3Q5TH69 TSPY21P-201ENST00000433481 731 ntBASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms