Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 NEFHP1-201ENST00000412845 2629 ntBASIC19.62■□□□□ 0.73
EIF3EP60228 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.62■□□□□ 0.73
EIF3EP60228 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
EIF3EP60228 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
EIF3EP60228 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EIF3EP60228 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.61■□□□□ 0.73
EIF3EP60228 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.61■□□□□ 0.73
EIF3EP60228 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.61■□□□□ 0.73
EIF3EP60228 RN7SL471P-201ENST00000580476 299 ntBASIC19.61■□□□□ 0.73
EIF3EP60228 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EIF3EP60228 AC006058.3-201ENST00000606217 1069 ntBASIC19.61■□□□□ 0.73
EIF3EP60228 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.61■□□□□ 0.73
EIF3EP60228 AC073648.6-201ENST00000641589 218 ntBASIC19.61■□□□□ 0.73
EIF3EP60228 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
EIF3EP60228 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.61■□□□□ 0.73
EIF3EP60228 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
EIF3EP60228 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
EIF3EP60228 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.61■□□□□ 0.73
EIF3EP60228 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
EIF3EP60228 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EIF3EP60228 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.6■□□□□ 0.73
EIF3EP60228 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
EIF3EP60228 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.6■□□□□ 0.73
EIF3EP60228 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.6■□□□□ 0.73
EIF3EP60228 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.6■□□□□ 0.73
EIF3EP60228 AC133681.1-201ENST00000465482 601 ntBASIC19.6■□□□□ 0.73
EIF3EP60228 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.6■□□□□ 0.73
EIF3EP60228 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.6■□□□□ 0.73
EIF3EP60228 AC110285.5-201ENST00000611501 352 ntBASIC19.6■□□□□ 0.73
EIF3EP60228 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.6■□□□□ 0.73
EIF3EP60228 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 AC083906.6-201ENST00000641366 219 ntBASIC19.6■□□□□ 0.73
EIF3EP60228 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
EIF3EP60228 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.6■□□□□ 0.73
EIF3EP60228 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
EIF3EP60228 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.59■□□□□ 0.73
EIF3EP60228 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
EIF3EP60228 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.59■□□□□ 0.73
EIF3EP60228 WIZP1-201ENST00000531444 2299 ntBASIC19.59■□□□□ 0.73
EIF3EP60228 AC138932.1-201ENST00000534164 6830 ntBASIC19.59■□□□□ 0.73
EIF3EP60228 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
EIF3EP60228 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.59■□□□□ 0.73
EIF3EP60228 Z85996.1-201ENST00000494644 937 ntBASIC19.59■□□□□ 0.73
EIF3EP60228 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.59■□□□□ 0.73
EIF3EP60228 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.59■□□□□ 0.73
EIF3EP60228 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.59■□□□□ 0.73
EIF3EP60228 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
EIF3EP60228 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
EIF3EP60228 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.59■□□□□ 0.73
EIF3EP60228 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
EIF3EP60228 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EIF3EP60228 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.58■□□□□ 0.73
EIF3EP60228 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EIF3EP60228 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
EIF3EP60228 AC104581.1-202ENST00000635932 2618 ntBASIC19.58■□□□□ 0.73
EIF3EP60228 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EIF3EP60228 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
EIF3EP60228 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EIF3EP60228 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EIF3EP60228 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.58■□□□□ 0.73
EIF3EP60228 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
EIF3EP60228 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
EIF3EP60228 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms