Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 UPK3BP1-201ENST00000428678 509 ntBASIC18.77■□□□□ 0.6
CLDN2P57739 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN2P57739 AL671277.2-201ENST00000458060 996 ntBASIC18.77■□□□□ 0.6
CLDN2P57739 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.77■□□□□ 0.6
CLDN2P57739 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN2P57739 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.77■□□□□ 0.6
CLDN2P57739 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN2P57739 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN2P57739 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN2P57739 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLDN2P57739 AC091076.1-201ENST00000610741 619 ntBASIC18.77■□□□□ 0.6
CLDN2P57739 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN2P57739 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.77■□□□□ 0.59
CLDN2P57739 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CLDN2P57739 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN2P57739 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN2P57739 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN2P57739 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN2P57739 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN2P57739 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN2P57739 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN2P57739 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.76■□□□□ 0.59
CLDN2P57739 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN2P57739 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN2P57739 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN2P57739 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN2P57739 AP000523.1-201ENST00000398242 1049 ntBASIC18.75■□□□□ 0.59
CLDN2P57739 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN2P57739 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN2P57739 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN2P57739 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN2P57739 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN2P57739 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN2P57739 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN2P57739 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN2P57739 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CLDN2P57739 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN2P57739 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
CLDN2P57739 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CLDN2P57739 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN2P57739 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN2P57739 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.74■□□□□ 0.59
CLDN2P57739 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN2P57739 FAM86EP-206ENST00000510506 987 ntBASIC18.74■□□□□ 0.59
CLDN2P57739 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN2P57739 NEK4P2-201ENST00000580004 1012 ntBASIC18.74■□□□□ 0.59
CLDN2P57739 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CLDN2P57739 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 AL158211.5-201ENST00000623583 2518 ntBASIC18.74■□□□□ 0.59
CLDN2P57739 AFG3L1P-217ENST00000557444 2447 ntBASIC18.74■□□□□ 0.59
CLDN2P57739 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN2P57739 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN2P57739 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CLDN2P57739 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN2P57739 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms