Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN12P56749 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN12P56749 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CLDN12P56749 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN12P56749 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN12P56749 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 AC124283.5-201ENST00000624661 1809 ntBASIC16.54■□□□□ 0.24
CLDN12P56749 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
CLDN12P56749 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CLDN12P56749 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN12P56749 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CLDN12P56749 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLDN12P56749 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.53■□□□□ 0.24
CLDN12P56749 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN12P56749 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLDN12P56749 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
CLDN12P56749 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.53■□□□□ 0.24
CLDN12P56749 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN12P56749 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.53■□□□□ 0.24
CLDN12P56749 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.53■□□□□ 0.24
CLDN12P56749 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLDN12P56749 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN12P56749 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN12P56749 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN12P56749 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLDN12P56749 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN12P56749 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN12P56749 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CLDN12P56749 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN12P56749 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CLDN12P56749 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 LSM12P1-201ENST00000411836 588 ntBASIC16.52■□□□□ 0.24
CLDN12P56749 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.52■□□□□ 0.24
CLDN12P56749 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN12P56749 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN12P56749 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CLDN12P56749 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN12P56749 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.52■□□□□ 0.23
CLDN12P56749 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN12P56749 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN12P56749 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN12P56749 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CLDN12P56749 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN12P56749 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.52■□□□□ 0.23
CLDN12P56749 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN12P56749 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN12P56749 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN12P56749 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN12P56749 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 FEM1AP3-201ENST00000403722 1741 ntBASIC16.51■□□□□ 0.23
CLDN12P56749 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN12P56749 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN12P56749 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 AC007322.1-201ENST00000426983 750 ntBASIC16.51■□□□□ 0.23
CLDN12P56749 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN12P56749 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN12P56749 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN12P56749 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN12P56749 ABALON-201ENST00000629058 1903 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms