Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.92■□□□□ 0.94
PMS1P54277 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS1P54277 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PMS1P54277 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.92■□□□□ 0.94
PMS1P54277 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS1P54277 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS1P54277 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
PMS1P54277 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PMS1P54277 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.91■□□□□ 0.94
PMS1P54277 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.91■□□□□ 0.94
PMS1P54277 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
PMS1P54277 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PMS1P54277 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PMS1P54277 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.91■□□□□ 0.94
PMS1P54277 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PMS1P54277 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 ANO7L1-203ENST00000602586 1720 ntBASIC20.91■□□□□ 0.94
PMS1P54277 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.91■□□□□ 0.94
PMS1P54277 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS1P54277 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PMS1P54277 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PMS1P54277 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.9■□□□□ 0.94
PMS1P54277 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.9■□□□□ 0.94
PMS1P54277 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.9■□□□□ 0.94
PMS1P54277 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.9■□□□□ 0.94
PMS1P54277 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 TSPY20P-201ENST00000450910 630 ntBASIC20.9■□□□□ 0.94
PMS1P54277 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.9■□□□□ 0.94
PMS1P54277 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.9■□□□□ 0.94
PMS1P54277 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.9■□□□□ 0.94
PMS1P54277 AL353708.3-201ENST00000610272 989 ntBASIC20.9■□□□□ 0.94
PMS1P54277 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.9■□□□□ 0.94
PMS1P54277 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.9■□□□□ 0.94
PMS1P54277 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.9■□□□□ 0.94
PMS1P54277 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS1P54277 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
PMS1P54277 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.89■□□□□ 0.93
PMS1P54277 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PMS1P54277 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PMS1P54277 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.89■□□□□ 0.93
PMS1P54277 AC008040.2-201ENST00000461049 708 ntBASIC20.89■□□□□ 0.93
PMS1P54277 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.89■□□□□ 0.93
PMS1P54277 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PMS1P54277 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PMS1P54277 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.89■□□□□ 0.93
PMS1P54277 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.89■□□□□ 0.93
PMS1P54277 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.89■□□□□ 0.93
PMS1P54277 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS1P54277 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PMS1P54277 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.88■□□□□ 0.93
PMS1P54277 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.88■□□□□ 0.93
PMS1P54277 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS1P54277 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS1P54277 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms