Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 KRT8P17-201ENST00000453110 1448 ntBASIC19.38■□□□□ 0.69
ATXN3P54252 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.38■□□□□ 0.69
ATXN3P54252 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.38■□□□□ 0.69
ATXN3P54252 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.38■□□□□ 0.69
ATXN3P54252 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ATXN3P54252 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 PTBP1P-201ENST00000554374 1601 ntBASIC19.37■□□□□ 0.69
ATXN3P54252 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ATXN3P54252 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
ATXN3P54252 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ATXN3P54252 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.37■□□□□ 0.69
ATXN3P54252 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.37■□□□□ 0.69
ATXN3P54252 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.37■□□□□ 0.69
ATXN3P54252 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.37■□□□□ 0.69
ATXN3P54252 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.37■□□□□ 0.69
ATXN3P54252 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
ATXN3P54252 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATXN3P54252 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ATXN3P54252 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.36■□□□□ 0.69
ATXN3P54252 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.36■□□□□ 0.69
ATXN3P54252 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 TNXA-203ENST00000507684 2038 ntBASIC19.36■□□□□ 0.69
ATXN3P54252 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.36■□□□□ 0.69
ATXN3P54252 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 TUBB8P6-201ENST00000436895 1288 ntBASIC19.36■□□□□ 0.69
ATXN3P54252 AC011506.1-201ENST00000474329 610 ntBASIC19.36■□□□□ 0.69
ATXN3P54252 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.36■□□□□ 0.69
ATXN3P54252 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.36■□□□□ 0.69
ATXN3P54252 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
ATXN3P54252 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.36■□□□□ 0.69
ATXN3P54252 AC116562.4-202ENST00000641738 218 ntBASIC19.36■□□□□ 0.69
ATXN3P54252 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.36■□□□□ 0.69
ATXN3P54252 BX323043.1-201ENST00000641006 1765 ntBASIC19.36■□□□□ 0.69
ATXN3P54252 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ATXN3P54252 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATXN3P54252 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
ATXN3P54252 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.35■□□□□ 0.69
ATXN3P54252 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ATXN3P54252 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ATXN3P54252 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
ATXN3P54252 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.35■□□□□ 0.69
ATXN3P54252 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 RNF152P1-201ENST00000397754 604 ntBASIC19.35■□□□□ 0.69
ATXN3P54252 CCR12P-201ENST00000446203 998 ntBASIC19.35■□□□□ 0.69
ATXN3P54252 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.35■□□□□ 0.69
ATXN3P54252 KRT18P56-201ENST00000507275 550 ntBASIC19.35■□□□□ 0.69
ATXN3P54252 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.35■□□□□ 0.69
ATXN3P54252 FAM87A-204ENST00000613235 858 ntBASIC19.35■□□□□ 0.69
ATXN3P54252 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.35■□□□□ 0.69
ATXN3P54252 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.35■□□□□ 0.69
ATXN3P54252 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.35■□□□□ 0.69
ATXN3P54252 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATXN3P54252 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATXN3P54252 AC117947.1-201ENST00000427448 529 ntBASIC19.34■□□□□ 0.69
ATXN3P54252 AC004980.1-204ENST00000429707 299 ntBASIC19.34■□□□□ 0.69
ATXN3P54252 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.34■□□□□ 0.69
ATXN3P54252 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.34■□□□□ 0.69
ATXN3P54252 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.34■□□□□ 0.69
ATXN3P54252 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms