Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC008403.3-201ENST00000598924 454 ntBASIC16.85■□□□□ 0.29
SRP9P49458 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRP9P49458 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.85■□□□□ 0.29
SRP9P49458 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.85■□□□□ 0.29
SRP9P49458 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SRP9P49458 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SRP9P49458 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SRP9P49458 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRP9P49458 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRP9P49458 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SRP9P49458 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SRP9P49458 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRP9P49458 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.85■□□□□ 0.29
SRP9P49458 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRP9P49458 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SRP9P49458 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.84■□□□□ 0.29
SRP9P49458 AC020916.1-201ENST00000587762 1774 ntBASIC16.84■□□□□ 0.29
SRP9P49458 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SRP9P49458 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.84■□□□□ 0.29
SRP9P49458 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SRP9P49458 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SRP9P49458 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SRP9P49458 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.84■□□□□ 0.29
SRP9P49458 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SRP9P49458 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.84■□□□□ 0.29
SRP9P49458 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.84■□□□□ 0.29
SRP9P49458 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.84■□□□□ 0.29
SRP9P49458 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.84■□□□□ 0.29
SRP9P49458 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SRP9P49458 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.84■□□□□ 0.29
SRP9P49458 PHGDH-210ENST00000641115 1638 ntBASIC16.84■□□□□ 0.29
SRP9P49458 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SRP9P49458 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 NOC2LP1-202ENST00000452600 2235 ntBASIC16.84■□□□□ 0.29
SRP9P49458 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRP9P49458 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SRP9P49458 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SRP9P49458 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.83■□□□□ 0.28
SRP9P49458 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
SRP9P49458 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SRP9P49458 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.83■□□□□ 0.28
SRP9P49458 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 NOC2LP2-201ENST00000407594 1944 ntBASIC16.83■□□□□ 0.28
SRP9P49458 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.83■□□□□ 0.28
SRP9P49458 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.83■□□□□ 0.28
SRP9P49458 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 TSPY20P-201ENST00000450910 630 ntBASIC16.83■□□□□ 0.28
SRP9P49458 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.83■□□□□ 0.28
SRP9P49458 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.83■□□□□ 0.28
SRP9P49458 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.83■□□□□ 0.28
SRP9P49458 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SRP9P49458 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.83■□□□□ 0.28
SRP9P49458 PRKY-204ENST00000533551 1019 ntBASIC16.83■□□□□ 0.28
SRP9P49458 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.83■□□□□ 0.28
SRP9P49458 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.83■□□□□ 0.28
SRP9P49458 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SRP9P49458 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.83■□□□□ 0.28
SRP9P49458 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 AC006058.3-201ENST00000606217 1069 ntBASIC16.83■□□□□ 0.28
SRP9P49458 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SRP9P49458 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRP9P49458 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.82■□□□□ 0.28
SRP9P49458 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SRP9P49458 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.82■□□□□ 0.28
SRP9P49458 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.82■□□□□ 0.28
SRP9P49458 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SRP9P49458 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.82■□□□□ 0.28
SRP9P49458 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms