Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.15□□□□□ -0.3
PCP4P48539 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
PCP4P48539 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PCP4P48539 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.15□□□□□ -0.3
PCP4P48539 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.15□□□□□ -0.3
PCP4P48539 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.15□□□□□ -0.3
PCP4P48539 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCP4P48539 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PCP4P48539 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
PCP4P48539 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.15□□□□□ -0.31
PCP4P48539 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
PCP4P48539 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.14□□□□□ -0.31
PCP4P48539 FAM45BP-202ENST00000592932 1624 ntBASIC13.14□□□□□ -0.31
PCP4P48539 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 LYSMD4-203ENST00000378904 2122 ntBASIC13.14□□□□□ -0.31
PCP4P48539 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.14□□□□□ -0.31
PCP4P48539 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PCP4P48539 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.14□□□□□ -0.31
PCP4P48539 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.14□□□□□ -0.31
PCP4P48539 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.14□□□□□ -0.31
PCP4P48539 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
PCP4P48539 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PCP4P48539 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCP4P48539 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PCP4P48539 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.13□□□□□ -0.31
PCP4P48539 AC007326.2-201ENST00000624224 7579 ntBASIC13.13□□□□□ -0.31
PCP4P48539 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PCP4P48539 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.13□□□□□ -0.31
PCP4P48539 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PCP4P48539 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.13□□□□□ -0.31
PCP4P48539 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.13□□□□□ -0.31
PCP4P48539 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.13□□□□□ -0.31
PCP4P48539 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PCP4P48539 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.13□□□□□ -0.31
PCP4P48539 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
PCP4P48539 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
PCP4P48539 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.12□□□□□ -0.31
PCP4P48539 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PCP4P48539 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCP4P48539 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms