Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ALDH3A2-218ENST00000579403 582 ntTSL 213.53□□□□□ -0.243e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-204ENST00000446398 665 ntTSL 513.1□□□□□ -0.313e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.353e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-203ENST00000395575 3640 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.533e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.593e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-202ENST00000339618 3828 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.653e-7■■■■□ 20.3
RPS3P23396 ALDH3A2-206ENST00000472059 3710 ntTSL 210.41□□□□□ -0.743e-7■■■■□ 20.3
RPS3P23396 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.781e-8■■■■□ 20.3
RPS3P23396 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC9.84□□□□□ -0.831e-8■■■■□ 20.3
RPS3P23396 SDHA-219ENST00000515815 704 ntTSL 311.64□□□□□ -0.556e-7■■■■□ 20.3
RPS3P23396 TMBIM1-208ENST00000434015 580 ntTSL 312.56□□□□□ -0.41e-8■■■■□ 20.3
RPS3P23396 TF-212ENST00000493011 999 ntTSL 218.46■□□□□ 0.557e-27■■■■□ 20.3
RPS3P23396 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.167e-8■■■■□ 20.3
RPS3P23396 SLC43A3-205ENST00000525205 862 ntTSL 39.95□□□□□ -0.824e-6■■■■□ 20.3
RPS3P23396 SLC43A3-226ENST00000625097 1796 nt7.85□□□□□ -1.154e-6■■■■□ 20.3
RPS3P23396 HM13-224ENST00000498035 3932 ntTSL 2 BASIC8.15□□□□□ -1.16e-11■■■■□ 20.3
RPS3P23396 CPNE1-214ENST00000435747 400 ntTSL 39.89□□□□□ -0.839e-8■■■■□ 20.3
RPS3P23396 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.17■□□□□ 0.826e-7■■■■□ 20.3
RPS3P23396 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.666e-7■■■■□ 20.3
RPS3P23396 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.76■□□□□ 0.436e-7■■■■□ 20.3
RPS3P23396 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.55■□□□□ 0.46e-7■■■■□ 20.3
RPS3P23396 REEP5-201ENST00000261482 683 ntTSL 524.03■■□□□ 1.441e-6■■■■□ 20.3
RPS3P23396 REEP5-203ENST00000474542 650 ntTSL 415.78■□□□□ 0.121e-6■■■■□ 20.3
RPS3P23396 EBP-204ENST00000466461 694 ntTSL 29.1□□□□□ -0.951e-7■■■■□ 20.3
RPS3P23396 NUP107-209ENST00000538993 836 ntTSL 56.53□□□□□ -1.364e-7■■■■□ 20.3
RPS3P23396 SDHB-208ENST00000491274 649 ntTSL 56.45□□□□□ -1.389e-7■■■■□ 20.2
RPS3P23396 SDHB-202ENST00000463045 702 ntTSL 34.99□□□□□ -1.619e-7■■■■□ 20.2
RPS3P23396 SDHB-205ENST00000475506 550 ntTSL 22.87□□□□□ -1.959e-7■■■■□ 20.2
RPS3P23396 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC12.63□□□□□ -0.395e-8■■■■□ 20.2
RPS3P23396 SEC13-214ENST00000476597 614 ntTSL 210.42□□□□□ -0.746e-10■■■■□ 20.2
RPS3P23396 CTNNA1-213ENST00000519113 859 ntTSL 317.91■□□□□ 0.465e-7■■■■□ 20.2
RPS3P23396 NUP107-203ENST00000401003 729 ntTSL 512.07□□□□□ -0.485e-7■■■■□ 20.2
RPS3P23396 LMAN2-205ENST00000506310 564 ntTSL 413.97□□□□□ -0.172e-7■■■■□ 20.2
RPS3P23396 CTSB-229ENST00000533572 975 ntTSL 316.93■□□□□ 0.32e-9■■■■□ 20.2
RPS3P23396 ESYT1-203ENST00000547667 594 ntTSL 213.18□□□□□ -0.36e-7■■■■□ 20.2
RPS3P23396 UBA52-212ENST00000599256 927 ntTSL 222.76■■□□□ 1.233e-18■■■■□ 20.2
RPS3P23396 UBA52-211ENST00000598814 550 ntTSL 1 (best)14.77□□□□□ -0.053e-18■■■■□ 20.2
RPS3P23396 NDUFS3-204ENST00000525378 779 ntTSL 211.21□□□□□ -0.611e-6■■■■□ 20.2
RPS3P23396 NDUFS3-203ENST00000525212 530 ntTSL 27.62□□□□□ -1.191e-6■■■■□ 20.2
RPS3P23396 GRB10-212ENST00000439044 733 ntTSL 521.82■■□□□ 1.081e-7■■■■□ 20.2
RPS3P23396 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.081e-7■■■■□ 20.2
RPS3P23396 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.34■□□□□ 0.851e-7■■■■□ 20.2
RPS3P23396 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.641e-7■■■■□ 20.2
RPS3P23396 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.32■□□□□ 0.521e-7■■■■□ 20.2
RPS3P23396 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.95■□□□□ 0.31e-11■■■■□ 20.2
RPS3P23396 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.24■□□□□ 0.196e-8■■■■□ 20.2
RPS3P23396 PLCD1-202ENST00000417185 685 ntTSL 214.84□□□□□ -0.031e-7■■■■□ 20.2
RPS3P23396 AHSA1-204ENST00000554156 588 ntTSL 214.5□□□□□ -0.091e-11■■■■□ 20.2
RPS3P23396 EIF3G-212ENST00000592485 893 ntTSL 213.23□□□□□ -0.298e-10■■■■□ 20.2
RPS3P23396 ECD-201ENST00000372979 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.633e-7■■■■□ 20.2
RPS3P23396 EIF3G-203ENST00000587168 352 ntTSL 410.7□□□□□ -0.78e-10■■■■□ 20.2
RPS3P23396 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC10.57□□□□□ -0.723e-7■■■■□ 20.2
RPS3P23396 ECD-203ENST00000430082 2246 ntTSL 1 (best) BASIC9.23□□□□□ -0.933e-7■■■■□ 20.2
RPS3P23396 DAP3-222ENST00000496863 742 ntTSL 29.15□□□□□ -0.948e-10■■■■□ 20.2
RPS3P23396 DAP3-205ENST00000462002 716 ntTSL 38.99□□□□□ -0.978e-10■■■■□ 20.2
RPS3P23396 ECD-206ENST00000484976 1679 ntTSL 1 (best)8.88□□□□□ -0.993e-7■■■■□ 20.2
RPS3P23396 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.85□□□□□ -0.995e-23■■■■□ 20.2
RPS3P23396 NCAPD2-206ENST00000538600 290 ntTSL 38.44□□□□□ -1.061e-7■■■■□ 20.2
RPS3P23396 DAP3-211ENST00000470830 439 ntTSL 37.73□□□□□ -1.178e-10■■■■□ 20.2
RPS3P23396 AHSA1-212ENST00000556963 787 ntTSL 27.3□□□□□ -1.241e-11■■■■□ 20.2
RPS3P23396 STT3A-213ENST00000531001 325 ntTSL 36.47□□□□□ -1.371e-7■■■■□ 20.2
RPS3P23396 DAP3-226ENST00000608852 384 ntTSL 35.93□□□□□ -1.468e-10■■■■□ 20.2
RPS3P23396 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.84□□□□□ -1.638e-10■■■■□ 20.2
RPS3P23396 SAP18-204ENST00000471009 670 ntTSL 23.39□□□□□ -1.871e-7■■■■□ 20.2
RPS3P23396 COPB1-205ENST00000526527 438 ntTSL 22.5□□□□□ -2.015e-12■■■■□ 20.2
RPS3P23396 DAP3-213ENST00000471523 576 ntTSL 22.41□□□□□ -2.028e-10■■■■□ 20.2
RPS3P23396 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.87□□□□□ -2.279e-9■■■■□ 20.2
RPS3P23396 MAD2L1-205ENST00000512484 626 ntTSL 2-0.29□□□□□ -2.468e-10■■■■□ 20.2
RPS3P23396 PKLR-203ENST00000434082 580 ntTSL 513.66□□□□□ -0.221e-6■■■■□ 20.2
RPS3P23396 XRCC5-207ENST00000471649 610 ntTSL 26.04□□□□□ -1.444e-7■■■■□ 20.2
RPS3P23396 LMAN2-202ENST00000502560 876 ntTSL 318.12■□□□□ 0.492e-7■■■■□ 20.2
RPS3P23396 ATP6V1E1-208ENST00000481365 692 ntTSL 46.8□□□□□ -1.328e-7■■■■□ 20.2
RPS3P23396 UBB-205ENST00000577640 724 ntTSL 59.97□□□□□ -0.813e-15■■■■□ 20.2
RPS3P23396 PSMA6-213ENST00000556221 423 ntTSL 30.91□□□□□ -2.261e-9■■■■□ 20.2
RPS3P23396 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.21□□□□□ -0.134e-13■■■■□ 20.2
RPS3P23396 ANXA7-205ENST00000492380 843 ntTSL 515.53■□□□□ 0.081e-7■■■■□ 20.2
RPS3P23396 APLP2-214ENST00000530132 542 ntTSL 420.11■□□□□ 0.818e-14■■■■□ 20.2
RPS3P23396 APLP2-218ENST00000533532 584 ntTSL 220.11■□□□□ 0.818e-14■■■■□ 20.2
RPS3P23396 RPN2-207ENST00000462163 712 ntTSL 39.36□□□□□ -0.911e-27■■■■□ 20.2
RPS3P23396 HBM-202ENST00000472539 592 ntTSL 520.32■□□□□ 0.847e-37■■■■□ 20.2
RPS3P23396 RPS19-207ENST00000600467 420 ntTSL 220.6■□□□□ 0.891e-24■■■■□ 20.2
RPS3P23396 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.79■□□□□ 0.122e-18■■■■□ 20.2
RPS3P23396 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.032e-18■■■■□ 20.2
RPS3P23396 RPS19-205ENST00000598466 601 ntTSL 211.6□□□□□ -0.555e-26■■■■□ 20.2
RPS3P23396 RPS19-208ENST00000601492 342 ntTSL 57.75□□□□□ -1.171e-24■■■■□ 20.2
RPS3P23396 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.095e-8■■■■□ 20.2
RPS3P23396 MBNL3-207ENST00000421707 946 ntTSL 512.14□□□□□ -0.477e-7■■■■□ 20.2
RPS3P23396 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.94□□□□□ -1.37e-7■■■■□ 20.2
RPS3P23396 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.59□□□□□ -1.357e-7■■■■□ 20.2
RPS3P23396 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.717e-7■■■■□ 20.2
RPS3P23396 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.877e-7■■■■□ 20.2
RPS3P23396 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.79□□□□□ -1.967e-7■■■■□ 20.2
RPS3P23396 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.68□□□□□ -2.147e-7■■■■□ 20.2
RPS3P23396 MCM5-208ENST00000465557 587 ntTSL 415.06■□□□□ 03e-7■■■■□ 20.2
RPS3P23396 MCM5-210ENST00000493569 468 ntTSL 313.58□□□□□ -0.243e-7■■■■□ 20.2
RPS3P23396 CES1-209ENST00000569260 499 ntTSL 53.92□□□□□ -1.783e-8■■■■□ 20.2
RPS3P23396 PSMD13-207ENST00000527982 2200 nt11.5□□□□□ -0.572e-7■■■■□ 20.2
RPS3P23396 CTNNB1-214ENST00000485265 835 ntTSL 22.76□□□□□ -1.972e-11■■■■□ 20.2
RPS3P23396 TFR2-203ENST00000461176 692 ntTSL 316.77■□□□□ 0.284e-6■■■■□ 20.2
RPS3P23396 COL2A1-209ENST00000546974 703 ntTSL 1 (best)13.84□□□□□ -0.193e-7■■■■□ 20.2
Retrieved 100 of 24,271 protein–RNA pairs in 242.3 ms