RNA–Protein interactions for RNA: ENST00000372979.8

ECD-201, Transcript of ecdysoneless cell cycle regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECD, Length 3,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECD-201ENST00000372979 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
ECD-201ENST00000372979 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.92
ECD-201ENST00000372979 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
ECD-201ENST00000372979 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
ECD-201ENST00000372979 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
ECD-201ENST00000372979 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
ECD-201ENST00000372979 ABCC9O60706 1549 aa19.44■□□□□ 0.7
ECD-201ENST00000372979 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
ECD-201ENST00000372979 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
ECD-201ENST00000372979 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
ECD-201ENST00000372979 MYO15BQ96JP2 1530 aa19.13■□□□□ 0.65
ECD-201ENST00000372979 LOC105371045A0A1W2PR82 267 aa19.04■□□□□ 0.64
ECD-201ENST00000372979 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
ECD-201ENST00000372979 FAM9AQ8IZU1 332 aaPredicted RBP18.93■□□□□ 0.62
ECD-201ENST00000372979 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
ECD-201ENST00000372979 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.61
ECD-201ENST00000372979 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
ECD-201ENST00000372979 TRIM41Q8WV44 630 aa18.77■□□□□ 0.59
ECD-201ENST00000372979 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.59
ECD-201ENST00000372979 NACADO15069 1562 aa18.7■□□□□ 0.58
ECD-201ENST00000372979 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
ECD-201ENST00000372979 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
ECD-201ENST00000372979 WIZO95785 1651 aa18.49■□□□□ 0.55
ECD-201ENST00000372979 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
ECD-201ENST00000372979 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
ECD-201ENST00000372979 HRCP23327 699 aa18.29■□□□□ 0.52
ECD-201ENST00000372979 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
ECD-201ENST00000372979 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
ECD-201ENST00000372979 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
ECD-201ENST00000372979 CCDC88BA6NC98 1476 aa18.15■□□□□ 0.5
ECD-201ENST00000372979 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
ECD-201ENST00000372979 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
ECD-201ENST00000372979 RANGAP1P46060 587 aaPredicted RBP18.08■□□□□ 0.48
ECD-201ENST00000372979 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
ECD-201ENST00000372979 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.48
ECD-201ENST00000372979 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
ECD-201ENST00000372979 SOGA1O94964 1423 aa17.97■□□□□ 0.47
ECD-201ENST00000372979 SMARCA2P51531 1590 aa17.97■□□□□ 0.47
ECD-201ENST00000372979 RUSC2Q8N2Y8 1516 aa17.92■□□□□ 0.46
ECD-201ENST00000372979 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
ECD-201ENST00000372979 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.45
ECD-201ENST00000372979 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
ECD-201ENST00000372979 EIF4G1Q04637 1599 aaKnown RBP17.81■□□□□ 0.44
ECD-201ENST00000372979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
ECD-201ENST00000372979 WRNQ14191 1432 aaPredicted RBP eCLIP17.77■□□□□ 0.44
ECD-201ENST00000372979 CEP162Q5TB80 1403 aa17.68■□□□□ 0.42
ECD-201ENST00000372979 CCER1Q8TC90 406 aaPredicted RBP17.65■□□□□ 0.42
ECD-201ENST00000372979 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
ECD-201ENST00000372979 PEG3Q9GZU2 1588 aa17.56■□□□□ 0.4
ECD-201ENST00000372979 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
ECD-201ENST00000372979 TNIKQ9UKE5 1360 aa17.56■□□□□ 0.4
ECD-201ENST00000372979 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
ECD-201ENST00000372979 GOLGA3Q08378 1498 aa17.49■□□□□ 0.39
ECD-201ENST00000372979 APLP2Q06481 763 aa17.48■□□□□ 0.39
ECD-201ENST00000372979 RAPGEF2Q9Y4G8 1499 aa17.47■□□□□ 0.39
ECD-201ENST00000372979 EEA1Q15075 1411 aa17.45■□□□□ 0.38
ECD-201ENST00000372979 CLIP1P30622 1438 aa17.43■□□□□ 0.38
ECD-201ENST00000372979 NCAPD3P42695 1498 aa17.43■□□□□ 0.38
ECD-201ENST00000372979 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
ECD-201ENST00000372979 CEP164Q9UPV0 1460 aa17.39■□□□□ 0.37
ECD-201ENST00000372979 ATP1B4Q9UN42 357 aaPredicted RBP17.34■□□□□ 0.37
ECD-201ENST00000372979 P3H3Q8IVL6 736 aa17.34■□□□□ 0.37
ECD-201ENST00000372979 ITGAEP38570 1179 aa17.32■□□□□ 0.36
ECD-201ENST00000372979 CUX1P39880 1505 aa17.3■□□□□ 0.36
ECD-201ENST00000372979 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
ECD-201ENST00000372979 KANK4Q5T7N3 995 aaPredicted RBP17.26■□□□□ 0.35
ECD-201ENST00000372979 CFTRP13569 1480 aa17.26■□□□□ 0.35
ECD-201ENST00000372979 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
ECD-201ENST00000372979 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
ECD-201ENST00000372979 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
ECD-201ENST00000372979 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
ECD-201ENST00000372979 CUX2O14529 1486 aa17.21■□□□□ 0.35
ECD-201ENST00000372979 NESP48681 1621 aa17.21■□□□□ 0.35
ECD-201ENST00000372979 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
ECD-201ENST00000372979 KIF21BO75037 1637 aa17.18■□□□□ 0.34
ECD-201ENST00000372979 PRXQ9BXM0 1461 aa17.13■□□□□ 0.33
ECD-201ENST00000372979 IGF1RP08069 1367 aa17.12■□□□□ 0.33
ECD-201ENST00000372979 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
ECD-201ENST00000372979 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
ECD-201ENST00000372979 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
ECD-201ENST00000372979 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
ECD-201ENST00000372979 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.33
ECD-201ENST00000372979 FANCD2Q9BXW9 1451 aa17.08■□□□□ 0.33
ECD-201ENST00000372979 DIEXFQ68CQ4 756 aaKnown RBP17.07■□□□□ 0.32
ECD-201ENST00000372979 TDRD9Q8NDG6 1382 aaKnown RBP17.03■□□□□ 0.32
ECD-201ENST00000372979 ARID3CA6NKF2 412 aa17■□□□□ 0.31
ECD-201ENST00000372979 FAM50AQ14320 339 aaKnown RBP17■□□□□ 0.31
ECD-201ENST00000372979 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
ECD-201ENST00000372979 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
ECD-201ENST00000372979 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
ECD-201ENST00000372979 ZNF316A6NFI3 1004 aaPredicted RBP16.92■□□□□ 0.3
ECD-201ENST00000372979 POLA1P09884 1462 aaPredicted RBP16.9■□□□□ 0.3
ECD-201ENST00000372979 FHOD3Q2V2M9 1422 aa16.89■□□□□ 0.29
ECD-201ENST00000372979 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
ECD-201ENST00000372979 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
ECD-201ENST00000372979 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
ECD-201ENST00000372979 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
ECD-201ENST00000372979 URB2Q14146 1524 aaKnown RBP16.82■□□□□ 0.28
ECD-201ENST00000372979 MIER1Q8N108 512 aa16.8■□□□□ 0.28
ECD-201ENST00000372979 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms