RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
SDHB-205ENST00000475506 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
SDHB-205ENST00000475506 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
SDHB-205ENST00000475506 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
SDHB-205ENST00000475506 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
SDHB-205ENST00000475506 ADRA2BP18089 450 aa16.83■□□□□ 0.28
SDHB-205ENST00000475506 FOXD1Q16676 465 aa16.71■□□□□ 0.27
SDHB-205ENST00000475506 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
SDHB-205ENST00000475506 KCNA4P22459 653 aa16.36■□□□□ 0.21
SDHB-205ENST00000475506 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
SDHB-205ENST00000475506 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
SDHB-205ENST00000475506 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
SDHB-205ENST00000475506 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
SDHB-205ENST00000475506 CSRNP3Q8WYN3 585 aa15.58■□□□□ 0.08
SDHB-205ENST00000475506 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
SDHB-205ENST00000475506 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
SDHB-205ENST00000475506 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
SDHB-205ENST00000475506 ZBTB22O15209 634 aa15.13■□□□□ 0.01
SDHB-205ENST00000475506 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
SDHB-205ENST00000475506 MSH5O43196 834 aa14.99□□□□□ -0.01
SDHB-205ENST00000475506 MAPK8IP2Q13387 824 aaPredicted RBP14.97□□□□□ -0.01
SDHB-205ENST00000475506 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
SDHB-205ENST00000475506 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
SDHB-205ENST00000475506 RNF216Q9NWF9 866 aaPredicted RBP14.73□□□□□ -0.05
SDHB-205ENST00000475506 POTEDQ86YR6 584 aa14.54□□□□□ -0.08
SDHB-205ENST00000475506 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.09
SDHB-205ENST00000475506 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
SDHB-205ENST00000475506 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
SDHB-205ENST00000475506 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
SDHB-205ENST00000475506 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
SDHB-205ENST00000475506 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
SDHB-205ENST00000475506 FKBP8Q14318 412 aa13.98□□□□□ -0.17
SDHB-205ENST00000475506 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
SDHB-205ENST00000475506 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
SDHB-205ENST00000475506 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
SDHB-205ENST00000475506 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
SDHB-205ENST00000475506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.211e-7■□□□□ 11.1
SDHB-205ENST00000475506 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
SDHB-205ENST00000475506 SAMD1Q6SPF0 538 aaPredicted RBP13.65□□□□□ -0.22
SDHB-205ENST00000475506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
SDHB-205ENST00000475506 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
SDHB-205ENST00000475506 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
SDHB-205ENST00000475506 MKRN4PQ13434 485 aaPredicted RBP13.31□□□□□ -0.28
SDHB-205ENST00000475506 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
SDHB-205ENST00000475506 APLP2Q06481 763 aa13.25□□□□□ -0.29
SDHB-205ENST00000475506 PROM2Q8N271 834 aa13.2□□□□□ -0.3
SDHB-205ENST00000475506 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
SDHB-205ENST00000475506 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
SDHB-205ENST00000475506 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
SDHB-205ENST00000475506 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
SDHB-205ENST00000475506 POLA2Q14181 598 aa13.07□□□□□ -0.32
SDHB-205ENST00000475506 FBLN2P98095 1184 aa13.06□□□□□ -0.32
SDHB-205ENST00000475506 IFNLR1Q8IU57 520 aaPredicted RBP13.01□□□□□ -0.33
SDHB-205ENST00000475506 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
SDHB-205ENST00000475506 CAPN15O75808 1086 aa12.96□□□□□ -0.33
SDHB-205ENST00000475506 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
SDHB-205ENST00000475506 PKD2Q13563 968 aa12.86□□□□□ -0.35
SDHB-205ENST00000475506 ABCB7O75027 752 aa12.84□□□□□ -0.35
SDHB-205ENST00000475506 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
SDHB-205ENST00000475506 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.37
SDHB-205ENST00000475506 DCAF8L2P0C7V8 631 aa12.76□□□□□ -0.37
SDHB-205ENST00000475506 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
SDHB-205ENST00000475506 SPOCK2Q92563 424 aa12.64□□□□□ -0.39
SDHB-205ENST00000475506 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
SDHB-205ENST00000475506 DSG3P32926 999 aa12.63□□□□□ -0.39
SDHB-205ENST00000475506 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
SDHB-205ENST00000475506 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
SDHB-205ENST00000475506 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
SDHB-205ENST00000475506 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
SDHB-205ENST00000475506 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
SDHB-205ENST00000475506 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
SDHB-205ENST00000475506 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
SDHB-205ENST00000475506 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
SDHB-205ENST00000475506 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
SDHB-205ENST00000475506 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
SDHB-205ENST00000475506 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
SDHB-205ENST00000475506 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
SDHB-205ENST00000475506 RGL2O15211 777 aa12.5□□□□□ -0.41
SDHB-205ENST00000475506 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
SDHB-205ENST00000475506 MIER1Q8N108 512 aa12.46□□□□□ -0.41
SDHB-205ENST00000475506 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.41
SDHB-205ENST00000475506 PAXIP1Q6ZW49 1069 aaPredicted RBP12.43□□□□□ -0.42
SDHB-205ENST00000475506 BCANQ96GW7 911 aa12.43□□□□□ -0.42
SDHB-205ENST00000475506 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
SDHB-205ENST00000475506 PRKCSHP14314 528 aaPredicted RBP12.39□□□□□ -0.43
SDHB-205ENST00000475506 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
SDHB-205ENST00000475506 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
SDHB-205ENST00000475506 CIZ1Q9ULV3 898 aaPredicted RBP12.32□□□□□ -0.44
SDHB-205ENST00000475506 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
SDHB-205ENST00000475506 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
SDHB-205ENST00000475506 CHGAP10645 457 aaKnown RBP12.27□□□□□ -0.45
SDHB-205ENST00000475506 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
SDHB-205ENST00000475506 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
SDHB-205ENST00000475506 RNF25Q96BH1 459 aaPredicted RBP12.2□□□□□ -0.46
SDHB-205ENST00000475506 HS6ST3Q8IZP7 471 aa12.16□□□□□ -0.46
SDHB-205ENST00000475506 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
SDHB-205ENST00000475506 NUBP1P53384 320 aa12.15□□□□□ -0.46
SDHB-205ENST00000475506 TPRNQ4KMQ1 711 aa12.15□□□□□ -0.46
SDHB-205ENST00000475506 DNAJC5Q9H3Z4 198 aa12.11□□□□□ -0.47
SDHB-205ENST00000475506 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms