RNA–Protein interactions for RNA: ENST00000463045.2

SDHB-202, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-202ENST00000463045 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
SDHB-202ENST00000463045 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
SDHB-202ENST00000463045 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
SDHB-202ENST00000463045 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
SDHB-202ENST00000463045 FOXD1Q16676 465 aa18.68■□□□□ 0.58
SDHB-202ENST00000463045 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
SDHB-202ENST00000463045 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
SDHB-202ENST00000463045 ADRA2BP18089 450 aa17.84■□□□□ 0.45
SDHB-202ENST00000463045 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
SDHB-202ENST00000463045 MSH5O43196 834 aa17.27■□□□□ 0.36
SDHB-202ENST00000463045 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
SDHB-202ENST00000463045 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
SDHB-202ENST00000463045 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
SDHB-202ENST00000463045 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
SDHB-202ENST00000463045 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
SDHB-202ENST00000463045 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
SDHB-202ENST00000463045 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
SDHB-202ENST00000463045 KCNA4P22459 653 aa15.71■□□□□ 0.11
SDHB-202ENST00000463045 RNF216Q9NWF9 866 aaPredicted RBP15.59■□□□□ 0.09
SDHB-202ENST00000463045 NPM3O75607 178 aaKnown RBP15.58■□□□□ 0.08
SDHB-202ENST00000463045 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
SDHB-202ENST00000463045 DCAF8L1A6NGE4 600 aa15.39■□□□□ 0.05
SDHB-202ENST00000463045 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
SDHB-202ENST00000463045 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
SDHB-202ENST00000463045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.021e-7■□□□□ 11.1
SDHB-202ENST00000463045 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
SDHB-202ENST00000463045 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
SDHB-202ENST00000463045 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
SDHB-202ENST00000463045 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
SDHB-202ENST00000463045 C1QBPQ07021 282 aaKnown RBP14.59□□□□□ -0.07
SDHB-202ENST00000463045 ZBTB22O15209 634 aa14.5□□□□□ -0.09
SDHB-202ENST00000463045 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
SDHB-202ENST00000463045 MYCNP04198 464 aaPredicted RBP14.38□□□□□ -0.11
SDHB-202ENST00000463045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
SDHB-202ENST00000463045 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
SDHB-202ENST00000463045 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
SDHB-202ENST00000463045 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
SDHB-202ENST00000463045 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
SDHB-202ENST00000463045 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
SDHB-202ENST00000463045 CAPN15O75808 1086 aa14.25□□□□□ -0.13
SDHB-202ENST00000463045 APLP2Q06481 763 aa14.21□□□□□ -0.13
SDHB-202ENST00000463045 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
SDHB-202ENST00000463045 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
SDHB-202ENST00000463045 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
SDHB-202ENST00000463045 DSG3P32926 999 aa14.02□□□□□ -0.17
SDHB-202ENST00000463045 ABCB7O75027 752 aa13.97□□□□□ -0.17
SDHB-202ENST00000463045 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
SDHB-202ENST00000463045 POLA2Q14181 598 aa13.85□□□□□ -0.19
SDHB-202ENST00000463045 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
SDHB-202ENST00000463045 FBLN2P98095 1184 aa13.45□□□□□ -0.26
SDHB-202ENST00000463045 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
SDHB-202ENST00000463045 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
SDHB-202ENST00000463045 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
SDHB-202ENST00000463045 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
SDHB-202ENST00000463045 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
SDHB-202ENST00000463045 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
SDHB-202ENST00000463045 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
SDHB-202ENST00000463045 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
SDHB-202ENST00000463045 ZNF692Q9BU19 519 aaPredicted RBP13.14□□□□□ -0.31
SDHB-202ENST00000463045 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
SDHB-202ENST00000463045 SSUH2Q9Y2M2 353 aa13.05□□□□□ -0.32
SDHB-202ENST00000463045 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
SDHB-202ENST00000463045 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
SDHB-202ENST00000463045 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
SDHB-202ENST00000463045 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
SDHB-202ENST00000463045 FKBP8Q14318 412 aa12.87□□□□□ -0.35
SDHB-202ENST00000463045 PROM2Q8N271 834 aa12.86□□□□□ -0.35
SDHB-202ENST00000463045 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
SDHB-202ENST00000463045 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
SDHB-202ENST00000463045 POTEHQ6S545 545 aa12.71□□□□□ -0.37
SDHB-202ENST00000463045 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
SDHB-202ENST00000463045 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
SDHB-202ENST00000463045 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.382e-8■■■□□ 17.9
SDHB-202ENST00000463045 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
SDHB-202ENST00000463045 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
SDHB-202ENST00000463045 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
SDHB-202ENST00000463045 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
SDHB-202ENST00000463045 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
SDHB-202ENST00000463045 MIER1Q8N108 512 aa12.41□□□□□ -0.42
SDHB-202ENST00000463045 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
SDHB-202ENST00000463045 HAX1O00165 279 aa12.37□□□□□ -0.43
SDHB-202ENST00000463045 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
SDHB-202ENST00000463045 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
SDHB-202ENST00000463045 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
SDHB-202ENST00000463045 VASPP50552 380 aaPredicted RBP12.27□□□□□ -0.45
SDHB-202ENST00000463045 C19orf67A6NJJ6 358 aa12.26□□□□□ -0.45
SDHB-202ENST00000463045 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
SDHB-202ENST00000463045 EVX2Q03828 476 aa12.25□□□□□ -0.45
SDHB-202ENST00000463045 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
SDHB-202ENST00000463045 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
SDHB-202ENST00000463045 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
SDHB-202ENST00000463045 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
SDHB-202ENST00000463045 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
SDHB-202ENST00000463045 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
SDHB-202ENST00000463045 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
SDHB-202ENST00000463045 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
SDHB-202ENST00000463045 NUBP1P53384 320 aa12.07□□□□□ -0.48
SDHB-202ENST00000463045 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
SDHB-202ENST00000463045 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
SDHB-202ENST00000463045 GABBR2O75899 941 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms