RNA–Protein interactions for RNA: ENST00000485265.1

CTNNB1-214, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-214ENST00000485265 AEBP2Q6ZN18 517 aaPredicted RBP33.21■■■□□ 2.91
CTNNB1-214ENST00000485265 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
CTNNB1-214ENST00000485265 PHF23Q9BUL5 403 aaPredicted RBP28.21■■■□□ 2.11
CTNNB1-214ENST00000485265 SENP3Q9H4L4 574 aaPredicted RBP28.19■■■□□ 2.1
CTNNB1-214ENST00000485265 FOXD1Q16676 465 aa26.23■■□□□ 1.79
CTNNB1-214ENST00000485265 PLPPR3Q6T4P5 718 aa25.89■■□□□ 1.74
CTNNB1-214ENST00000485265 PPP6R1Q9UPN7 881 aa24.99■■□□□ 1.59
CTNNB1-214ENST00000485265 ADRA2BP18089 450 aa24.92■■□□□ 1.58
CTNNB1-214ENST00000485265 PIAS4Q8N2W9 510 aaPredicted RBP24.62■■□□□ 1.53
CTNNB1-214ENST00000485265 MSH5O43196 834 aa24.29■■□□□ 1.48
CTNNB1-214ENST00000485265 POTEDQ86YR6 584 aa23.6■■□□□ 1.37
CTNNB1-214ENST00000485265 PPP4R3CPQ6ZMV5 832 aa22.77■■□□□ 1.24
CTNNB1-214ENST00000485265 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
CTNNB1-214ENST00000485265 MAPK8IP2Q13387 824 aaPredicted RBP22.72■■□□□ 1.23
CTNNB1-214ENST00000485265 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
CTNNB1-214ENST00000485265 CNKSR2Q8WXI2 1034 aa22.2■■□□□ 1.14
CTNNB1-214ENST00000485265 NCBP3Q53F19 620 aaKnown RBP22.03■■□□□ 1.12
CTNNB1-214ENST00000485265 KCNA4P22459 653 aa21.88■■□□□ 1.09
CTNNB1-214ENST00000485265 HOXD11P31277 338 aaPredicted RBP21.88■■□□□ 1.09
CTNNB1-214ENST00000485265 RNF216Q9NWF9 866 aaPredicted RBP21.86■■□□□ 1.09
CTNNB1-214ENST00000485265 NPM3O75607 178 aaKnown RBP21.78■■□□□ 1.08
CTNNB1-214ENST00000485265 DCAF8L1A6NGE4 600 aa21.44■■□□□ 1.02
CTNNB1-214ENST00000485265 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
CTNNB1-214ENST00000485265 RNF39Q9H2S5 420 aa20.81■□□□□ 0.92
CTNNB1-214ENST00000485265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.79■□□□□ 0.921e-6■□□□□ 8.5
CTNNB1-214ENST00000485265 SLC4A1APQ9BWU0 796 aaKnown RBP20.74■□□□□ 0.91
CTNNB1-214ENST00000485265 SLC4A2P04920 1241 aa20.66■□□□□ 0.9
CTNNB1-214ENST00000485265 C1QBPQ07021 282 aaKnown RBP20.52■□□□□ 0.88
CTNNB1-214ENST00000485265 U3KPZ7 1027 aaPredicted RBP20.48■□□□□ 0.87
CTNNB1-214ENST00000485265 CACNB1Q02641 598 aaPredicted RBP20.45■□□□□ 0.86
CTNNB1-214ENST00000485265 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
CTNNB1-214ENST00000485265 ZBTB22O15209 634 aa20.16■□□□□ 0.82
CTNNB1-214ENST00000485265 MYCNP04198 464 aaPredicted RBP20.1■□□□□ 0.81
CTNNB1-214ENST00000485265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
CTNNB1-214ENST00000485265 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
CTNNB1-214ENST00000485265 SPINK5Q9NQ38 1064 aaPredicted RBP19.99■□□□□ 0.79
CTNNB1-214ENST00000485265 SAMD1Q6SPF0 538 aaPredicted RBP19.97■□□□□ 0.79
CTNNB1-214ENST00000485265 APLP2Q06481 763 aa19.9■□□□□ 0.78
CTNNB1-214ENST00000485265 CAPN15O75808 1086 aa19.89■□□□□ 0.77
CTNNB1-214ENST00000485265 EHMT2Q96KQ7 1210 aa19.77■□□□□ 0.76
CTNNB1-214ENST00000485265 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
CTNNB1-214ENST00000485265 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
CTNNB1-214ENST00000485265 ZNF219Q9P2Y4 722 aaPredicted RBP19.71■□□□□ 0.75
CTNNB1-214ENST00000485265 DSG3P32926 999 aa19.68■□□□□ 0.74
CTNNB1-214ENST00000485265 ATF5Q9Y2D1 282 aaPredicted RBP19.63■□□□□ 0.73
CTNNB1-214ENST00000485265 ATXN8OSP0DMR3 200 aa19.54■□□□□ 0.72
CTNNB1-214ENST00000485265 ABCB7O75027 752 aa19.49■□□□□ 0.71
CTNNB1-214ENST00000485265 POLA2Q14181 598 aa19.34■□□□□ 0.69
CTNNB1-214ENST00000485265 ZBTB12Q9Y330 459 aaPredicted RBP18.98■□□□□ 0.63
CTNNB1-214ENST00000485265 MKRN4PQ13434 485 aaPredicted RBP18.76■□□□□ 0.59
CTNNB1-214ENST00000485265 FBLN2P98095 1184 aa18.75■□□□□ 0.59
CTNNB1-214ENST00000485265 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
CTNNB1-214ENST00000485265 OSCARQ8IYS5 282 aa18.71■□□□□ 0.59
CTNNB1-214ENST00000485265 SPDYE2BA6NHP3 402 aa18.45■□□□□ 0.54
CTNNB1-214ENST00000485265 SPDYE6P0CI01 402 aa18.45■□□□□ 0.54
CTNNB1-214ENST00000485265 SPDYE2Q495Y8 402 aa18.45■□□□□ 0.54
CTNNB1-214ENST00000485265 AKT1S1Q96B36 256 aa18.44■□□□□ 0.54
CTNNB1-214ENST00000485265 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
CTNNB1-214ENST00000485265 SSUH2Q9Y2M2 353 aa18.31■□□□□ 0.52
CTNNB1-214ENST00000485265 POTEHQ6S545 545 aa18.29■□□□□ 0.52
CTNNB1-214ENST00000485265 REM2Q8IYK8 340 aaPredicted RBP18.27■□□□□ 0.52
CTNNB1-214ENST00000485265 SPDYE4A6NLX3 237 aa18.13■□□□□ 0.49
CTNNB1-214ENST00000485265 CHRDL2Q6WN34 429 aa18.09■□□□□ 0.49
CTNNB1-214ENST00000485265 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
CTNNB1-214ENST00000485265 PITPNM1O00562 1244 aa18.07■□□□□ 0.48
CTNNB1-214ENST00000485265 SPDYE1Q8NFV5 336 aaPredicted RBP17.98■□□□□ 0.47
CTNNB1-214ENST00000485265 CLEC11AQ9Y240 323 aa17.9■□□□□ 0.46
CTNNB1-214ENST00000485265 PROM2Q8N271 834 aa17.85■□□□□ 0.45
CTNNB1-214ENST00000485265 FKBP8Q14318 412 aa17.84■□□□□ 0.45
CTNNB1-214ENST00000485265 FXR2P51116 673 aaKnown RBP eCLIP17.81■□□□□ 0.44
CTNNB1-214ENST00000485265 PIP4P2Q8N4L2 257 aa17.8■□□□□ 0.44
CTNNB1-214ENST00000485265 PRR29P0C7W0 189 aa17.69■□□□□ 0.42
CTNNB1-214ENST00000485265 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
CTNNB1-214ENST00000485265 PRKAR2AP13861 404 aaKnown RBP17.59■□□□□ 0.41
CTNNB1-214ENST00000485265 CHADLQ6NUI6 762 aa17.53■□□□□ 0.4
CTNNB1-214ENST00000485265 CREBZFQ9NS37 354 aa17.44■□□□□ 0.38
CTNNB1-214ENST00000485265 FARP1Q9Y4F1 1045 aaPredicted RBP17.33■□□□□ 0.36
CTNNB1-214ENST00000485265 HAX1O00165 279 aa17.27■□□□□ 0.36
CTNNB1-214ENST00000485265 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
CTNNB1-214ENST00000485265 MNX1P50219 401 aaPredicted RBP17.25■□□□□ 0.35
CTNNB1-214ENST00000485265 C19orf67A6NJJ6 358 aa17.21■□□□□ 0.35
CTNNB1-214ENST00000485265 MIER1Q8N108 512 aa17.2■□□□□ 0.34
CTNNB1-214ENST00000485265 EVX2Q03828 476 aa17.17■□□□□ 0.34
CTNNB1-214ENST00000485265 PLCD3Q8N3E9 789 aa17.13■□□□□ 0.33
CTNNB1-214ENST00000485265 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
CTNNB1-214ENST00000485265 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
CTNNB1-214ENST00000485265 CD44P16070 742 aaKnown RBP17.07■□□□□ 0.32
CTNNB1-214ENST00000485265 VASPP50552 380 aaPredicted RBP17.07■□□□□ 0.32
CTNNB1-214ENST00000485265 SP7Q8TDD2 431 aaPredicted RBP17.07■□□□□ 0.32
CTNNB1-214ENST00000485265 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
CTNNB1-214ENST00000485265 ZRANB1Q9UGI0 708 aa16.92■□□□□ 0.3
CTNNB1-214ENST00000485265 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
CTNNB1-214ENST00000485265 NUBP1P53384 320 aa16.86■□□□□ 0.29
CTNNB1-214ENST00000485265 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
CTNNB1-214ENST00000485265 ZNF579Q8NAF0 562 aaKnown RBP16.86■□□□□ 0.29
CTNNB1-214ENST00000485265 IFNLR1Q8IU57 520 aaPredicted RBP16.84■□□□□ 0.29
CTNNB1-214ENST00000485265 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
CTNNB1-214ENST00000485265 TSPYL2Q9H2G4 693 aaPredicted RBP16.81■□□□□ 0.28
CTNNB1-214ENST00000485265 GABBR2O75899 941 aa16.8■□□□□ 0.28
CTNNB1-214ENST00000485265 CCDC61Q9Y6R9 512 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms