RNA–Protein interactions for RNA: ENST00000471649.1

XRCC5-207, Transcript of X-ray repair cross complementing 5, humanhuman

TSL 2

Gene XRCC5, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC5-207ENST00000471649 AEBP2Q6ZN18 517 aaPredicted RBP22.25■■□□□ 1.15
XRCC5-207ENST00000471649 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
XRCC5-207ENST00000471649 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
XRCC5-207ENST00000471649 PHF23Q9BUL5 403 aaPredicted RBP18.71■□□□□ 0.59
XRCC5-207ENST00000471649 FOXD1Q16676 465 aa17.63■□□□□ 0.41
XRCC5-207ENST00000471649 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
XRCC5-207ENST00000471649 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
XRCC5-207ENST00000471649 ADRA2BP18089 450 aa16.62■□□□□ 0.25
XRCC5-207ENST00000471649 PIAS4Q8N2W9 510 aaPredicted RBP16.51■□□□□ 0.23
XRCC5-207ENST00000471649 MSH5O43196 834 aa16.36■□□□□ 0.21
XRCC5-207ENST00000471649 POTEDQ86YR6 584 aa15.75■□□□□ 0.11
XRCC5-207ENST00000471649 MAPK8IP2Q13387 824 aaPredicted RBP15.24■□□□□ 0.03
XRCC5-207ENST00000471649 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
XRCC5-207ENST00000471649 PPP4R3CPQ6ZMV5 832 aa15□□□□□ -0.01
XRCC5-207ENST00000471649 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
XRCC5-207ENST00000471649 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
XRCC5-207ENST00000471649 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
XRCC5-207ENST00000471649 DCAF8L1A6NGE4 600 aa14.48□□□□□ -0.09
XRCC5-207ENST00000471649 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
XRCC5-207ENST00000471649 NCBP3Q53F19 620 aaKnown RBP14.41□□□□□ -0.1
XRCC5-207ENST00000471649 NPM3O75607 178 aaKnown RBP14.25□□□□□ -0.13
XRCC5-207ENST00000471649 KCNA4P22459 653 aa14.17□□□□□ -0.14
XRCC5-207ENST00000471649 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
XRCC5-207ENST00000471649 RNF39Q9H2S5 420 aa14□□□□□ -0.17
XRCC5-207ENST00000471649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.195e-10■■□□□ 13.2
XRCC5-207ENST00000471649 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
XRCC5-207ENST00000471649 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
XRCC5-207ENST00000471649 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
XRCC5-207ENST00000471649 SLC4A2P04920 1241 aa13.58□□□□□ -0.24
XRCC5-207ENST00000471649 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
XRCC5-207ENST00000471649 SPINK5Q9NQ38 1064 aaPredicted RBP13.39□□□□□ -0.27
XRCC5-207ENST00000471649 CAPN15O75808 1086 aa13.34□□□□□ -0.27
XRCC5-207ENST00000471649 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
XRCC5-207ENST00000471649 DSG3P32926 999 aa13.2□□□□□ -0.3
XRCC5-207ENST00000471649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
XRCC5-207ENST00000471649 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
XRCC5-207ENST00000471649 MYCNP04198 464 aaPredicted RBP13.14□□□□□ -0.31
XRCC5-207ENST00000471649 APLP2Q06481 763 aa13.14□□□□□ -0.31
XRCC5-207ENST00000471649 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
XRCC5-207ENST00000471649 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
XRCC5-207ENST00000471649 ABCB7O75027 752 aa13.08□□□□□ -0.32
XRCC5-207ENST00000471649 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
XRCC5-207ENST00000471649 ZBTB22O15209 634 aa13.03□□□□□ -0.32
XRCC5-207ENST00000471649 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
XRCC5-207ENST00000471649 NISCHQ9Y2I1 1504 aa12.92□□□□□ -0.34
XRCC5-207ENST00000471649 POLA2Q14181 598 aa12.86□□□□□ -0.35
XRCC5-207ENST00000471649 ATXN8OSP0DMR3 200 aa12.63□□□□□ -0.39
XRCC5-207ENST00000471649 CSRNP3Q8WYN3 585 aa12.58□□□□□ -0.4
XRCC5-207ENST00000471649 EHMT2Q96KQ7 1210 aa12.55□□□□□ -0.4
XRCC5-207ENST00000471649 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
XRCC5-207ENST00000471649 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
XRCC5-207ENST00000471649 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
XRCC5-207ENST00000471649 POTEHQ6S545 545 aa12.37□□□□□ -0.43
XRCC5-207ENST00000471649 FBLN2P98095 1184 aa12.32□□□□□ -0.44
XRCC5-207ENST00000471649 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
XRCC5-207ENST00000471649 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
XRCC5-207ENST00000471649 CHRDL2Q6WN34 429 aa12.24□□□□□ -0.45
XRCC5-207ENST00000471649 REM2Q8IYK8 340 aaPredicted RBP12.22□□□□□ -0.45
XRCC5-207ENST00000471649 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
XRCC5-207ENST00000471649 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
XRCC5-207ENST00000471649 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
XRCC5-207ENST00000471649 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
XRCC5-207ENST00000471649 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
XRCC5-207ENST00000471649 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
XRCC5-207ENST00000471649 PIP4P2Q8N4L2 257 aa12□□□□□ -0.49
XRCC5-207ENST00000471649 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
XRCC5-207ENST00000471649 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
XRCC5-207ENST00000471649 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.54e-9■■■□□ 15.9
XRCC5-207ENST00000471649 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
XRCC5-207ENST00000471649 SPDYE4A6NLX3 237 aa11.79□□□□□ -0.52
XRCC5-207ENST00000471649 PRKAR2AP13861 404 aaKnown RBP11.79□□□□□ -0.52
XRCC5-207ENST00000471649 PRR29P0C7W0 189 aa11.77□□□□□ -0.53
XRCC5-207ENST00000471649 HAX1O00165 279 aa11.76□□□□□ -0.53
XRCC5-207ENST00000471649 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
XRCC5-207ENST00000471649 EVX2Q03828 476 aa11.66□□□□□ -0.54
XRCC5-207ENST00000471649 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
XRCC5-207ENST00000471649 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
XRCC5-207ENST00000471649 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
XRCC5-207ENST00000471649 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
XRCC5-207ENST00000471649 CREBZFQ9NS37 354 aa11.51□□□□□ -0.57
XRCC5-207ENST00000471649 PROM2Q8N271 834 aa11.46□□□□□ -0.57
XRCC5-207ENST00000471649 CD44P16070 742 aaKnown RBP11.42□□□□□ -0.58
XRCC5-207ENST00000471649 FKBP8Q14318 412 aa11.41□□□□□ -0.58
XRCC5-207ENST00000471649 GABBR2O75899 941 aa11.37□□□□□ -0.59
XRCC5-207ENST00000471649 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
XRCC5-207ENST00000471649 ZRANB1Q9UGI0 708 aa11.31□□□□□ -0.6
XRCC5-207ENST00000471649 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.61
XRCC5-207ENST00000471649 MIER1Q8N108 512 aa11.26□□□□□ -0.61
XRCC5-207ENST00000471649 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
XRCC5-207ENST00000471649 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
XRCC5-207ENST00000471649 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
XRCC5-207ENST00000471649 PHF12Q96QT6 1004 aa11.18□□□□□ -0.62
XRCC5-207ENST00000471649 PLEKHG5O94827 1062 aa11.17□□□□□ -0.62
XRCC5-207ENST00000471649 CCDC180Q9P1Z9 1646 aa11.16□□□□□ -0.62
XRCC5-207ENST00000471649 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
XRCC5-207ENST00000471649 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
XRCC5-207ENST00000471649 GALR2O43603 387 aaPredicted RBP11.13□□□□□ -0.63
XRCC5-207ENST00000471649 CLCN6P51797 869 aa11.11□□□□□ -0.63
XRCC5-207ENST00000471649 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
XRCC5-207ENST00000471649 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms