Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DOBP13765 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HLA-DOBP13765 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DOBP13765 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DOBP13765 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOBP13765 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOBP13765 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HLA-DOBP13765 AC008040.2-201ENST00000461049 708 ntBASIC17.04■□□□□ 0.32
HLA-DOBP13765 AC091390.4-202ENST00000476426 537 ntBASIC17.04■□□□□ 0.32
HLA-DOBP13765 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.04■□□□□ 0.32
HLA-DOBP13765 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOBP13765 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DOBP13765 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOBP13765 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOBP13765 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOBP13765 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOBP13765 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOBP13765 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 AL031985.4-201ENST00000642138 673 ntBASIC17.03■□□□□ 0.32
HLA-DOBP13765 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 CROCCP3-202ENST00000420820 1947 ntBASIC17.03■□□□□ 0.32
HLA-DOBP13765 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 KRT8P11-201ENST00000409686 1436 ntBASIC17.03■□□□□ 0.32
HLA-DOBP13765 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOBP13765 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DOBP13765 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DOBP13765 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DOBP13765 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOBP13765 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOBP13765 RPS2P55-201ENST00000397318 883 ntBASIC17.02■□□□□ 0.32
HLA-DOBP13765 AC011506.1-201ENST00000474329 610 ntBASIC17.02■□□□□ 0.32
HLA-DOBP13765 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOBP13765 AC107956.1-201ENST00000494359 873 ntBASIC17.02■□□□□ 0.32
HLA-DOBP13765 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DOBP13765 CD177P1-201ENST00000606252 935 ntBASIC17.02■□□□□ 0.32
HLA-DOBP13765 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DOBP13765 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DOBP13765 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DOBP13765 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DOBP13765 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DOBP13765 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DOBP13765 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DOBP13765 AL135905.2-201ENST00000584934 1404 ntBASIC17.02■□□□□ 0.31
HLA-DOBP13765 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DOBP13765 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DOBP13765 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DOBP13765 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 AC004951.3-201ENST00000418645 1148 ntBASIC17.01■□□□□ 0.31
HLA-DOBP13765 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 Z99916.2-201ENST00000604037 246 ntBASIC17.01■□□□□ 0.31
HLA-DOBP13765 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DOBP13765 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DOBP13765 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DOBP13765 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DOBP13765 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DOBP13765 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DOBP13765 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DOBP13765 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DOBP13765 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DOBP13765 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms